Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.58■■□□□ 1.05
PMS2P54278 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PMS2P54278 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
PMS2P54278 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.58■■□□□ 1.05
PMS2P54278 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.58■■□□□ 1.05
PMS2P54278 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.05
PMS2P54278 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
PMS2P54278 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
PMS2P54278 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PMS2P54278 RARRES2P6-201ENST00000567333 442 ntBASIC21.58■■□□□ 1.05
PMS2P54278 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PMS2P54278 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PMS2P54278 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PMS2P54278 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.58■■□□□ 1.04
PMS2P54278 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PMS2P54278 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
PMS2P54278 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PMS2P54278 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PMS2P54278 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PMS2P54278 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PMS2P54278 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PMS2P54278 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PMS2P54278 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.57■■□□□ 1.04
PMS2P54278 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PMS2P54278 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
PMS2P54278 AC007952.6-201ENST00000573168 2673 ntBASIC21.57■■□□□ 1.04
PMS2P54278 AC003957.1-201ENST00000625108 2673 ntBASIC21.57■■□□□ 1.04
PMS2P54278 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PMS2P54278 AC010141.3-201ENST00000456659 717 ntBASIC21.57■■□□□ 1.04
PMS2P54278 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.57■■□□□ 1.04
PMS2P54278 AL034346.1-201ENST00000568244 1277 ntBASIC21.57■■□□□ 1.04
PMS2P54278 AL031432.3-201ENST00000607698 485 ntBASIC21.57■■□□□ 1.04
PMS2P54278 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
PMS2P54278 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
PMS2P54278 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.57■■□□□ 1.04
PMS2P54278 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.57■■□□□ 1.04
PMS2P54278 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PMS2P54278 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.57■■□□□ 1.04
PMS2P54278 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PMS2P54278 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
PMS2P54278 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PMS2P54278 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.56■■□□□ 1.04
PMS2P54278 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PMS2P54278 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PMS2P54278 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
PMS2P54278 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.56■■□□□ 1.04
PMS2P54278 SUDS3P1-201ENST00000505831 966 ntBASIC21.56■■□□□ 1.04
PMS2P54278 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.56■■□□□ 1.04
PMS2P54278 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PMS2P54278 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PMS2P54278 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PMS2P54278 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PMS2P54278 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PMS2P54278 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
PMS2P54278 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PMS2P54278 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
PMS2P54278 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PMS2P54278 EDA-201ENST00000338901 1233 ntBASIC21.55■■□□□ 1.04
PMS2P54278 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PMS2P54278 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.55■■□□□ 1.04
PMS2P54278 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
PMS2P54278 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PMS2P54278 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PMS2P54278 PLK5-205ENST00000642079 1969 ntBASIC21.55■■□□□ 1.04
PMS2P54278 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
PMS2P54278 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PMS2P54278 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
PMS2P54278 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PMS2P54278 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PMS2P54278 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.55■■□□□ 1.04
PMS2P54278 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PMS2P54278 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.54■■□□□ 1.04
PMS2P54278 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PMS2P54278 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
PMS2P54278 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PMS2P54278 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PMS2P54278 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.54■■□□□ 1.04
PMS2P54278 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PMS2P54278 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
PMS2P54278 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
PMS2P54278 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PMS2P54278 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PMS2P54278 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.54■■□□□ 1.04
PMS2P54278 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PMS2P54278 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
PMS2P54278 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.53■■□□□ 1.04
PMS2P54278 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.53■■□□□ 1.04
PMS2P54278 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PMS2P54278 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PMS2P54278 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.53■■□□□ 1.04
PMS2P54278 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PMS2P54278 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
PMS2P54278 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PMS2P54278 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PMS2P54278 OR2I1P-207ENST00000453522 948 ntBASIC21.53■■□□□ 1.04
PMS2P54278 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.53■■□□□ 1.04
PMS2P54278 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
PMS2P54278 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PMS2P54278 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.53■■□□□ 1.04
PMS2P54278 AL355001.2-201ENST00000620617 1191 ntBASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms