Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CLTCL1P53675 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC30.31■■■□□ 2.44
CLTCL1P53675 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
CLTCL1P53675 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
CLTCL1P53675 ME2-208ENST00000638937 2471 ntTSL 5 BASIC30.31■■■□□ 2.44
CLTCL1P53675 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CLTCL1P53675 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CLTCL1P53675 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC30.3■■■□□ 2.44
CLTCL1P53675 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CLTCL1P53675 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CLTCL1P53675 KRT18P29-201ENST00000397031 1267 ntBASIC30.3■■■□□ 2.44
CLTCL1P53675 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC30.3■■■□□ 2.44
CLTCL1P53675 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC30.3■■■□□ 2.44
CLTCL1P53675 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC30.3■■■□□ 2.44
CLTCL1P53675 GCSHP5-201ENST00000443090 522 ntBASIC30.3■■■□□ 2.44
CLTCL1P53675 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC30.3■■■□□ 2.44
CLTCL1P53675 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CLTCL1P53675 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC30.3■■■□□ 2.44
CLTCL1P53675 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
CLTCL1P53675 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CLTCL1P53675 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC30.3■■■□□ 2.44
CLTCL1P53675 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC30.3■■■□□ 2.44
CLTCL1P53675 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CLTCL1P53675 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CLTCL1P53675 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
CLTCL1P53675 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC30.29■■■□□ 2.44
CLTCL1P53675 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC30.29■■■□□ 2.44
CLTCL1P53675 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC30.29■■■□□ 2.44
CLTCL1P53675 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC30.29■■■□□ 2.44
CLTCL1P53675 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CLTCL1P53675 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CLTCL1P53675 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC30.29■■■□□ 2.44
CLTCL1P53675 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC30.29■■■□□ 2.44
CLTCL1P53675 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CLTCL1P53675 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
CLTCL1P53675 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC30.29■■■□□ 2.44
CLTCL1P53675 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC30.29■■■□□ 2.44
CLTCL1P53675 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CLTCL1P53675 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
CLTCL1P53675 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC30.28■■■□□ 2.44
CLTCL1P53675 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
CLTCL1P53675 PTPA-214ENST00000423100 988 ntTSL 2 BASIC30.28■■■□□ 2.44
CLTCL1P53675 AP003097.1-201ENST00000530657 1135 ntBASIC30.28■■■□□ 2.44
CLTCL1P53675 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
CLTCL1P53675 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CLTCL1P53675 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC30.28■■■□□ 2.44
CLTCL1P53675 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
CLTCL1P53675 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC30.28■■■□□ 2.44
CLTCL1P53675 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
CLTCL1P53675 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CLTCL1P53675 NARF-205ENST00000412079 1760 ntTSL 5 BASIC30.27■■■□□ 2.44
CLTCL1P53675 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CLTCL1P53675 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CLTCL1P53675 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC30.27■■■□□ 2.44
CLTCL1P53675 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CLTCL1P53675 CASK-201ENST00000378154 2494 ntTSL 5 BASIC30.27■■■□□ 2.44
CLTCL1P53675 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC30.27■■■□□ 2.44
CLTCL1P53675 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC30.26■■■□□ 2.44
CLTCL1P53675 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC30.26■■■□□ 2.44
CLTCL1P53675 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.44
CLTCL1P53675 ESRRAP1-201ENST00000400596 1257 ntBASIC30.26■■■□□ 2.44
CLTCL1P53675 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC30.26■■■□□ 2.44
CLTCL1P53675 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC30.26■■■□□ 2.44
CLTCL1P53675 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC30.26■■■□□ 2.44
CLTCL1P53675 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
CLTCL1P53675 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CLTCL1P53675 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CLTCL1P53675 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
CLTCL1P53675 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CLTCL1P53675 AC008403.3-201ENST00000598924 454 ntBASIC30.25■■■□□ 2.43
CLTCL1P53675 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC30.25■■■□□ 2.43
CLTCL1P53675 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC30.25■■■□□ 2.43
CLTCL1P53675 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CLTCL1P53675 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC30.25■■■□□ 2.43
CLTCL1P53675 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CLTCL1P53675 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC30.25■■■□□ 2.43
CLTCL1P53675 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CLTCL1P53675 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
CLTCL1P53675 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
CLTCL1P53675 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC30.25■■■□□ 2.43
CLTCL1P53675 AC006058.3-201ENST00000606217 1069 ntBASIC30.25■■■□□ 2.43
CLTCL1P53675 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
CLTCL1P53675 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CLTCL1P53675 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC30.24■■■□□ 2.43
CLTCL1P53675 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CLTCL1P53675 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC30.24■■■□□ 2.43
CLTCL1P53675 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC30.24■■■□□ 2.43
CLTCL1P53675 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC30.24■■■□□ 2.43
CLTCL1P53675 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CLTCL1P53675 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CLTCL1P53675 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CLTCL1P53675 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC30.23■■■□□ 2.43
CLTCL1P53675 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
CLTCL1P53675 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC30.23■■■□□ 2.43
CLTCL1P53675 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
CLTCL1P53675 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CLTCL1P53675 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
CLTCL1P53675 AC060766.5-201ENST00000590539 871 ntBASIC30.23■■■□□ 2.43
CLTCL1P53675 AC100791.3-201ENST00000617619 330 ntBASIC30.23■■■□□ 2.43
CLTCL1P53675 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms