Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLCN4P51793 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC22.16■■□□□ 1.14
CLCN4P51793 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC22.16■■□□□ 1.14
CLCN4P51793 UNC93B5-201ENST00000530315 699 ntBASIC22.16■■□□□ 1.14
CLCN4P51793 AP006294.2-201ENST00000641667 209 ntBASIC22.16■■□□□ 1.14
CLCN4P51793 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.16■■□□□ 1.14
CLCN4P51793 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
CLCN4P51793 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
CLCN4P51793 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.15■■□□□ 1.14
CLCN4P51793 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLCN4P51793 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CLCN4P51793 LSM12P1-201ENST00000411836 588 ntBASIC22.15■■□□□ 1.14
CLCN4P51793 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC22.15■■□□□ 1.14
CLCN4P51793 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC22.15■■□□□ 1.14
CLCN4P51793 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC22.15■■□□□ 1.14
CLCN4P51793 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CLCN4P51793 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLCN4P51793 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLCN4P51793 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CLCN4P51793 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLCN4P51793 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
CLCN4P51793 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.15■■□□□ 1.14
CLCN4P51793 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CLCN4P51793 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CLCN4P51793 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLCN4P51793 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
CLCN4P51793 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CLCN4P51793 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CLCN4P51793 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC22.14■■□□□ 1.13
CLCN4P51793 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC22.14■■□□□ 1.13
CLCN4P51793 AC026366.1-201ENST00000488803 879 ntBASIC22.14■■□□□ 1.13
CLCN4P51793 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC22.14■■□□□ 1.13
CLCN4P51793 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC22.14■■□□□ 1.13
CLCN4P51793 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
CLCN4P51793 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CLCN4P51793 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.14■■□□□ 1.13
CLCN4P51793 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.14■■□□□ 1.13
CLCN4P51793 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLCN4P51793 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CLCN4P51793 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.13■■□□□ 1.13
CLCN4P51793 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
CLCN4P51793 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLCN4P51793 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.13■■□□□ 1.13
CLCN4P51793 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLCN4P51793 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.13■■□□□ 1.13
CLCN4P51793 KRT17P1-201ENST00000399211 1546 ntBASIC22.13■■□□□ 1.13
CLCN4P51793 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.13■■□□□ 1.13
CLCN4P51793 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLCN4P51793 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CLCN4P51793 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CLCN4P51793 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC22.13■■□□□ 1.13
CLCN4P51793 AC091799.1-201ENST00000422823 811 ntBASIC22.13■■□□□ 1.13
CLCN4P51793 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLCN4P51793 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CLCN4P51793 AC142381.4-202ENST00000563973 229 ntBASIC22.13■■□□□ 1.13
CLCN4P51793 FAM21FP-204ENST00000608637 956 ntBASIC22.13■■□□□ 1.13
CLCN4P51793 MMD2-204ENST00000612910 778 ntTSL 5 BASIC22.13■■□□□ 1.13
CLCN4P51793 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CLCN4P51793 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLCN4P51793 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.13■■□□□ 1.13
CLCN4P51793 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLCN4P51793 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.13■■□□□ 1.13
CLCN4P51793 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CLCN4P51793 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.12■■□□□ 1.13
CLCN4P51793 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLCN4P51793 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLCN4P51793 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC22.12■■□□□ 1.13
CLCN4P51793 AL158047.1-201ENST00000445918 881 ntBASIC22.12■■□□□ 1.13
CLCN4P51793 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC22.12■■□□□ 1.13
CLCN4P51793 CASP6-205ENST00000505486 538 ntTSL 4 BASIC22.12■■□□□ 1.13
CLCN4P51793 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC22.12■■□□□ 1.13
CLCN4P51793 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLCN4P51793 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CLCN4P51793 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
CLCN4P51793 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CLCN4P51793 AC133561.1-201ENST00000568600 2415 ntBASIC22.11■■□□□ 1.13
CLCN4P51793 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CLCN4P51793 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.11■■□□□ 1.13
CLCN4P51793 AC092053.2-201ENST00000640557 1818 ntBASIC22.11■■□□□ 1.13
CLCN4P51793 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.11■■□□□ 1.13
CLCN4P51793 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC22.11■■□□□ 1.13
CLCN4P51793 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CLCN4P51793 AL355472.2-201ENST00000422958 438 ntBASIC22.11■■□□□ 1.13
CLCN4P51793 GATS-209ENST00000454084 1030 ntTSL 3 BASIC22.11■■□□□ 1.13
CLCN4P51793 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CLCN4P51793 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC22.11■■□□□ 1.13
CLCN4P51793 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.11■■□□□ 1.13
CLCN4P51793 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.11■■□□□ 1.13
CLCN4P51793 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CLCN4P51793 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CLCN4P51793 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CLCN4P51793 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.1■■□□□ 1.13
CLCN4P51793 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CLCN4P51793 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CLCN4P51793 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CLCN4P51793 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CLCN4P51793 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CLCN4P51793 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CLCN4P51793 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CLCN4P51793 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms