Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 MIR5787-201ENST00000611784 55 ntBASIC20.23■□□□□ 0.83
CLCN2P51788 MIR6084-201ENST00000622012 110 ntBASIC20.23■□□□□ 0.83
CLCN2P51788 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.23■□□□□ 0.83
CLCN2P51788 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLCN2P51788 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.23■□□□□ 0.83
CLCN2P51788 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
CLCN2P51788 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN2P51788 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN2P51788 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN2P51788 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN2P51788 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.22■□□□□ 0.83
CLCN2P51788 YBX1P1-201ENST00000445822 960 ntBASIC20.22■□□□□ 0.83
CLCN2P51788 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.22■□□□□ 0.83
CLCN2P51788 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
CLCN2P51788 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.22■□□□□ 0.83
CLCN2P51788 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN2P51788 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN2P51788 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN2P51788 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CLCN2P51788 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
CLCN2P51788 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CLCN2P51788 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN2P51788 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN2P51788 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN2P51788 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN2P51788 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CLCN2P51788 LINC01006-201ENST00000333319 2292 ntBASIC20.22■□□□□ 0.83
CLCN2P51788 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN2P51788 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN2P51788 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.21■□□□□ 0.83
CLCN2P51788 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN2P51788 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN2P51788 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN2P51788 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.21■□□□□ 0.83
CLCN2P51788 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.21■□□□□ 0.83
CLCN2P51788 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN2P51788 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN2P51788 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN2P51788 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.21■□□□□ 0.83
CLCN2P51788 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.21■□□□□ 0.83
CLCN2P51788 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN2P51788 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN2P51788 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.2■□□□□ 0.82
CLCN2P51788 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CLCN2P51788 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN2P51788 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.2■□□□□ 0.82
CLCN2P51788 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN2P51788 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN2P51788 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.2■□□□□ 0.82
CLCN2P51788 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN2P51788 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CLCN2P51788 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN2P51788 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN2P51788 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN2P51788 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN2P51788 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CLCN2P51788 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CLCN2P51788 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
CLCN2P51788 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
CLCN2P51788 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CLCN2P51788 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN2P51788 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN2P51788 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN2P51788 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN2P51788 AC123595.1-201ENST00000440769 1046 ntBASIC20.19■□□□□ 0.82
CLCN2P51788 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.19■□□□□ 0.82
CLCN2P51788 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.19■□□□□ 0.82
CLCN2P51788 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN2P51788 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN2P51788 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN2P51788 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN2P51788 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.19■□□□□ 0.82
CLCN2P51788 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.19■□□□□ 0.82
CLCN2P51788 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN2P51788 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN2P51788 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN2P51788 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN2P51788 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN2P51788 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN2P51788 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.18■□□□□ 0.82
CLCN2P51788 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.18■□□□□ 0.82
CLCN2P51788 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.18■□□□□ 0.82
CLCN2P51788 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.18■□□□□ 0.82
CLCN2P51788 AC087623.3-201ENST00000607047 1098 ntBASIC20.18■□□□□ 0.82
CLCN2P51788 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.18■□□□□ 0.82
CLCN2P51788 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN2P51788 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN2P51788 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN2P51788 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CLCN2P51788 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN2P51788 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN2P51788 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN2P51788 FEM1AP1-201ENST00000431297 1995 ntBASIC20.17■□□□□ 0.82
CLCN2P51788 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.17■□□□□ 0.82
CLCN2P51788 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN2P51788 AF106564.1-201ENST00000607058 2553 ntBASIC20.17■□□□□ 0.82
CLCN2P51788 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CLCN2P51788 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN2P51788 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CLCN2P51788 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms