Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF144AP50876 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF144AP50876 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.43■□□□□ 0.7
RNF144AP50876 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.43■□□□□ 0.7
RNF144AP50876 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF144AP50876 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RNF144AP50876 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF144AP50876 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF144AP50876 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RNF144AP50876 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF144AP50876 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF144AP50876 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF144AP50876 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RNF144AP50876 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF144AP50876 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RNF144AP50876 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF144AP50876 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF144AP50876 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF144AP50876 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF144AP50876 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RNF144AP50876 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF144AP50876 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF144AP50876 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF144AP50876 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.42■□□□□ 0.7
RNF144AP50876 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF144AP50876 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF144AP50876 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF144AP50876 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF144AP50876 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF144AP50876 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF144AP50876 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF144AP50876 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF144AP50876 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF144AP50876 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF144AP50876 SLC25A24-204ENST00000569674 2357 ntBASIC19.41■□□□□ 0.7
RNF144AP50876 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF144AP50876 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF144AP50876 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF144AP50876 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF144AP50876 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.41■□□□□ 0.7
RNF144AP50876 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
RNF144AP50876 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF144AP50876 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF144AP50876 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.41■□□□□ 0.7
RNF144AP50876 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF144AP50876 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF144AP50876 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF144AP50876 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF144AP50876 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF144AP50876 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF144AP50876 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF144AP50876 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF144AP50876 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RNF144AP50876 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF144AP50876 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF144AP50876 AC027612.3-201ENST00000413684 1047 ntBASIC19.4■□□□□ 0.7
RNF144AP50876 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF144AP50876 AC079140.4-201ENST00000507448 529 ntBASIC19.4■□□□□ 0.7
RNF144AP50876 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.4■□□□□ 0.7
RNF144AP50876 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF144AP50876 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF144AP50876 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.39■□□□□ 0.7
RNF144AP50876 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.7
RNF144AP50876 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RNF144AP50876 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.39■□□□□ 0.69
RNF144AP50876 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF144AP50876 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.39■□□□□ 0.69
RNF144AP50876 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF144AP50876 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.39■□□□□ 0.69
RNF144AP50876 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RNF144AP50876 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
RNF144AP50876 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RNF144AP50876 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF144AP50876 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF144AP50876 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
RNF144AP50876 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
RNF144AP50876 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RNF144AP50876 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.39■□□□□ 0.69
RNF144AP50876 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.39■□□□□ 0.69
RNF144AP50876 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF144AP50876 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF144AP50876 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RNF144AP50876 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
RNF144AP50876 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF144AP50876 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.38■□□□□ 0.69
RNF144AP50876 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.38■□□□□ 0.69
RNF144AP50876 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.38■□□□□ 0.69
RNF144AP50876 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RNF144AP50876 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF144AP50876 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.38■□□□□ 0.69
RNF144AP50876 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.38■□□□□ 0.69
RNF144AP50876 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.38■□□□□ 0.69
RNF144AP50876 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.38■□□□□ 0.69
RNF144AP50876 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF144AP50876 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF144AP50876 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.38■□□□□ 0.69
RNF144AP50876 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.38■□□□□ 0.69
RNF144AP50876 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RNF144AP50876 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF144AP50876 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms