Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeast

Predictions only

Length 289 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	P43569	SSE2	YBR169C	2082 nt		3.88	□□□□□ -1.79
CAF16	P43569	DAL5	YJR152W	1632 nt		3.88	□□□□□ -1.79
CAF16	P43569	MUB1	YMR100W	1863 nt		3.88	□□□□□ -1.79
CAF16	P43569	MIS1	YBR084W	2928 nt		3.88	□□□□□ -1.79
CAF16	P43569	SCY1	YGL083W	2415 nt		3.87	□□□□□ -1.79
CAF16	P43569	JHD2	YJR119C	2187 nt		3.87	□□□□□ -1.79
CAF16	P43569	VPS30	YPL120W	1674 nt		3.87	□□□□□ -1.79
CAF16	P43569	RNT1	YMR239C	1416 nt		3.87	□□□□□ -1.79
CAF16	P43569	CWC2	YDL209C	1020 nt		3.87	□□□□□ -1.79
CAF16	P43569	YAP6	YDR259C	1152 nt		3.87	□□□□□ -1.79
CAF16	P43569	SMX2	YFL017W-A	234 nt		3.87	□□□□□ -1.79
CAF16	P43569	YFR054C	YFR054C	579 nt		3.87	□□□□□ -1.79
CAF16	P43569	YLR076C	YLR076C	423 nt		3.87	□□□□□ -1.79
CAF16	P43569	YNR021W	YNR021W	1215 nt		3.87	□□□□□ -1.79
CAF16	P43569	YBR062C	YBR062C	543 nt		3.87	□□□□□ -1.79
CAF16	P43569	snR41	snR41	95 nt		3.87	□□□□□ -1.79
CAF16	P43569	RAD52	YML032C	1416 nt		3.87	□□□□□ -1.79
CAF16	P43569	RRI2	YOL117W	1938 nt		3.86	□□□□□ -1.79
CAF16	P43569	KGD1	YIL125W	3045 nt		3.86	□□□□□ -1.79
CAF16	P43569	TRX3	YCR083W	384 nt		3.86	□□□□□ -1.79
CAF16	P43569	YER119C-A	YER119C-A	372 nt		3.86	□□□□□ -1.79
CAF16	P43569	YIL046W-A	YIL046W-A	165 nt		3.86	□□□□□ -1.79
CAF16	P43569	YAL044W-A	YAL044W-A	333 nt		3.86	□□□□□ -1.79
CAF16	P43569	CNB1	YKL190W	528 nt		3.86	□□□□□ -1.79
CAF16	P43569	YKT6	YKL196C	603 nt		3.86	□□□□□ -1.79
CAF16	P43569	RIM9	YMR063W	720 nt		3.86	□□□□□ -1.79
CAF16	P43569	SIW14	YNL032W	846 nt		3.86	□□□□□ -1.79
CAF16	P43569	YOR331C	YOR331C	558 nt		3.86	□□□□□ -1.79
CAF16	P43569	GAC1	YOR178C	2382 nt		3.86	□□□□□ -1.79
CAF16	P43569	YAP1802	YGR241C	1707 nt		3.86	□□□□□ -1.79
CAF16	P43569	TAF7	YMR227C	1773 nt		3.86	□□□□□ -1.79
CAF16	P43569	DSF2	YBR007C	2211 nt		3.86	□□□□□ -1.79
CAF16	P43569	HRR25	YPL204W	1485 nt		3.86	□□□□□ -1.79
CAF16	P43569	HBT1	YDL223C	3141 nt		3.85	□□□□□ -1.79
CAF16	P43569	EMC1	YCL045C	2283 nt		3.85	□□□□□ -1.79
CAF16	P43569	BI2	Q0110	1272 nt		3.85	□□□□□ -1.79
CAF16	P43569	BNA6	YFR047C	888 nt		3.85	□□□□□ -1.79
CAF16	P43569	YGL108C	YGL108C	423 nt		3.85	□□□□□ -1.79
CAF16	P43569	IRC9	YJL142C	393 nt		3.85	□□□□□ -1.79
CAF16	P43569	GON7	YJL184W	372 nt		3.85	□□□□□ -1.79
CAF16	P43569	RNH203	YLR154C	333 nt		3.85	□□□□□ -1.79
CAF16	P43569	ARC18	YLR370C	537 nt		3.85	□□□□□ -1.79
CAF16	P43569	RHO5	YNL180C	996 nt		3.85	□□□□□ -1.79
CAF16	P43569	ATG3	YNR007C	933 nt		3.85	□□□□□ -1.79
CAF16	P43569	PEX5	YDR244W	1839 nt		3.85	□□□□□ -1.79
CAF16	P43569	YMR221C	YMR221C	1515 nt		3.85	□□□□□ -1.79
CAF16	P43569	EXO5	YBR163W	1758 nt		3.84	□□□□□ -1.79
CAF16	P43569	SNA4	YDL123W	423 nt		3.84	□□□□□ -1.79
CAF16	P43569	FRQ1	YDR373W	573 nt		3.84	□□□□□ -1.79
CAF16	P43569	RPS8B	YER102W	603 nt		3.84	□□□□□ -1.79
CAF16	P43569	BUD13	YGL174W	801 nt		3.84	□□□□□ -1.79
CAF16	P43569	YGR073C	YGR073C	372 nt		3.84	□□□□□ -1.79
CAF16	P43569	SOL4	YGR248W	768 nt		3.84	□□□□□ -1.79
CAF16	P43569	NFU1	YKL040C	771 nt		3.84	□□□□□ -1.79
CAF16	P43569	YKL044W	YKL044W	321 nt		3.84	□□□□□ -1.79
CAF16	P43569	RPL13B	YMR142C	600 nt		3.84	□□□□□ -1.79
CAF16	P43569	ADY4	YLR227C	1482 nt		3.84	□□□□□ -1.8
CAF16	P43569	UTP15	YMR093W	1542 nt		3.84	□□□□□ -1.8
CAF16	P43569	MSH4	YFL003C	2637 nt		3.84	□□□□□ -1.8
CAF16	P43569	SPO13	YHR014W	876 nt		3.83	□□□□□ -1.8
CAF16	P43569	RPI1	YIL119C	1224 nt		3.83	□□□□□ -1.8
CAF16	P43569	YKL156C-A	YKL156C-A	117 nt		3.83	□□□□□ -1.8
CAF16	P43569	YLR297W	YLR297W	390 nt		3.83	□□□□□ -1.8
CAF16	P43569	CTK3	YML112W	891 nt		3.83	□□□□□ -1.8
CAF16	P43569	YMR001C-A	YMR001C-A	231 nt		3.83	□□□□□ -1.8
CAF16	P43569	YPR096C	YPR096C	303 nt		3.83	□□□□□ -1.8
CAF16	P43569	YPR169W-A	YPR169W-A	219 nt		3.83	□□□□□ -1.8
CAF16	P43569	YPR170W-B	YPR170W-B	258 nt		3.83	□□□□□ -1.8
CAF16	P43569	EAP1	YKL204W	1899 nt		3.83	□□□□□ -1.8
CAF16	P43569	FAS2	YPL231W	5664 nt		3.83	□□□□□ -1.8
CAF16	P43569	MCD4	YKL165C	2760 nt		3.82	□□□□□ -1.8
CAF16	P43569	PCK1	YKR097W	1650 nt		3.82	□□□□□ -1.8
CAF16	P43569	HRD1	YOL013C	1656 nt		3.82	□□□□□ -1.8
CAF16	P43569	YDR061W	YDR061W	1620 nt		3.82	□□□□□ -1.8
CAF16	P43569	IRC2	YDR112W	309 nt		3.82	□□□□□ -1.8
CAF16	P43569	RSM24	YDR175C	960 nt		3.82	□□□□□ -1.8
CAF16	P43569	NSA2	YER126C	786 nt		3.82	□□□□□ -1.8
CAF16	P43569	ECL1	YGR146C	636 nt		3.82	□□□□□ -1.8
CAF16	P43569	SDH3	YKL141W	597 nt		3.82	□□□□□ -1.8
CAF16	P43569	BUD28	YLR062C	378 nt		3.82	□□□□□ -1.8
CAF16	P43569	SFM1	YOR021C	642 nt		3.82	□□□□□ -1.8
CAF16	P43569	YPR050C	YPR050C	414 nt		3.82	□□□□□ -1.8
CAF16	P43569	TOM5	YPR133W-A	153 nt		3.82	□□□□□ -1.8
CAF16	P43569	YBR141W-A	YBR141W-A	96 nt		3.82	□□□□□ -1.8
CAF16	P43569	SPT16	YGL207W	3108 nt		3.82	□□□□□ -1.8
CAF16	P43569	YDR338C	YDR338C	2088 nt		3.82	□□□□□ -1.8
CAF16	P43569	YNL193W	YNL193W	1677 nt		3.81	□□□□□ -1.8
CAF16	P43569	YRR1	YOR162C	2433 nt		3.81	□□□□□ -1.8
CAF16	P43569	MPS1	YDL028C	2295 nt		3.81	□□□□□ -1.8
CAF16	P43569	SMT3	YDR510W	306 nt		3.81	□□□□□ -1.8
CAF16	P43569	SEC53	YFL045C	765 nt		3.81	□□□□□ -1.8
CAF16	P43569	YAP3	YHL009C	993 nt		3.81	□□□□□ -1.8
CAF16	P43569	GAT4	YIR013C	366 nt		3.81	□□□□□ -1.8
CAF16	P43569	YJL127C-B	YJL127C-B	159 nt		3.81	□□□□□ -1.8
CAF16	P43569	MRPL3	YMR024W	1173 nt		3.81	□□□□□ -1.8
CAF16	P43569	HHF1	YBR009C	312 nt		3.81	□□□□□ -1.8
CAF16	P43569	BAR1	YIL015W	1764 nt		3.81	□□□□□ -1.8
CAF16	P43569	FMP25	YLR077W	1752 nt		3.81	□□□□□ -1.8
CAF16	P43569	SEG1	YMR086W	2883 nt		3.81	□□□□□ -1.8
CAF16	P43569	SSH1	YBR283C	1473 nt		3.8	□□□□□ -1.8

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