Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTSKP43235 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTSKP43235 AC137767.1-201ENST00000602918 1920 ntBASIC20.84■□□□□ 0.93
CTSKP43235 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTSKP43235 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.84■□□□□ 0.93
CTSKP43235 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTSKP43235 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CTSKP43235 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTSKP43235 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTSKP43235 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTSKP43235 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CTSKP43235 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.84■□□□□ 0.93
CTSKP43235 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.84■□□□□ 0.93
CTSKP43235 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.84■□□□□ 0.93
CTSKP43235 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.84■□□□□ 0.93
CTSKP43235 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTSKP43235 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CTSKP43235 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.84■□□□□ 0.93
CTSKP43235 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTSKP43235 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTSKP43235 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTSKP43235 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTSKP43235 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTSKP43235 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CTSKP43235 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
CTSKP43235 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.83■□□□□ 0.93
CTSKP43235 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTSKP43235 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.83■□□□□ 0.93
CTSKP43235 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTSKP43235 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTSKP43235 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTSKP43235 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CTSKP43235 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTSKP43235 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CTSKP43235 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTSKP43235 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CTSKP43235 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTSKP43235 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTSKP43235 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTSKP43235 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.82■□□□□ 0.92
CTSKP43235 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.82■□□□□ 0.92
CTSKP43235 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTSKP43235 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTSKP43235 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTSKP43235 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.82■□□□□ 0.92
CTSKP43235 BX276092.2-201ENST00000417668 665 ntBASIC20.82■□□□□ 0.92
CTSKP43235 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.82■□□□□ 0.92
CTSKP43235 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.82■□□□□ 0.92
CTSKP43235 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.82■□□□□ 0.92
CTSKP43235 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTSKP43235 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
CTSKP43235 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTSKP43235 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTSKP43235 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTSKP43235 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.82■□□□□ 0.92
CTSKP43235 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CTSKP43235 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTSKP43235 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTSKP43235 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTSKP43235 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CTSKP43235 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.81■□□□□ 0.92
CTSKP43235 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTSKP43235 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTSKP43235 KRT18P29-201ENST00000397031 1267 ntBASIC20.81■□□□□ 0.92
CTSKP43235 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.81■□□□□ 0.92
CTSKP43235 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CTSKP43235 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTSKP43235 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.81■□□□□ 0.92
CTSKP43235 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.81■□□□□ 0.92
CTSKP43235 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.81■□□□□ 0.92
CTSKP43235 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.81■□□□□ 0.92
CTSKP43235 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTSKP43235 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTSKP43235 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTSKP43235 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTSKP43235 AC087742.1-201ENST00000575880 1738 ntBASIC20.81■□□□□ 0.92
CTSKP43235 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTSKP43235 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTSKP43235 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTSKP43235 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.8■□□□□ 0.92
CTSKP43235 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.8■□□□□ 0.92
CTSKP43235 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTSKP43235 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTSKP43235 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CTSKP43235 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CTSKP43235 KRT16P2-201ENST00000414673 1423 ntBASIC20.8■□□□□ 0.92
CTSKP43235 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CTSKP43235 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CTSKP43235 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTSKP43235 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CTSKP43235 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
CTSKP43235 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.8■□□□□ 0.92
CTSKP43235 AL162412.1-201ENST00000567129 965 ntBASIC20.8■□□□□ 0.92
CTSKP43235 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.8■□□□□ 0.92
CTSKP43235 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTSKP43235 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTSKP43235 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTSKP43235 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTSKP43235 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CTSKP43235 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms