Protein–RNA interactions for Protein: P39900

MMP12, Macrophage metalloelastase, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP12P39900 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MMP12P39900 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MMP12P39900 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
MMP12P39900 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MMP12P39900 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
MMP12P39900 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MMP12P39900 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MMP12P39900 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MMP12P39900 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
MMP12P39900 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MMP12P39900 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MMP12P39900 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.92■□□□□ 0.94
MMP12P39900 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MMP12P39900 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MMP12P39900 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MMP12P39900 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MMP12P39900 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
MMP12P39900 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MMP12P39900 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.92■□□□□ 0.94
MMP12P39900 NCF1B-203ENST00000435988 1254 ntBASIC20.92■□□□□ 0.94
MMP12P39900 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.92■□□□□ 0.94
MMP12P39900 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MMP12P39900 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.92■□□□□ 0.94
MMP12P39900 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MMP12P39900 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.92■□□□□ 0.94
MMP12P39900 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
MMP12P39900 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
MMP12P39900 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.92■□□□□ 0.94
MMP12P39900 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
MMP12P39900 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
MMP12P39900 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
MMP12P39900 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MMP12P39900 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
MMP12P39900 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MMP12P39900 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MMP12P39900 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MMP12P39900 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MMP12P39900 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MMP12P39900 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MMP12P39900 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.91■□□□□ 0.94
MMP12P39900 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.91■□□□□ 0.94
MMP12P39900 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.91■□□□□ 0.94
MMP12P39900 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.91■□□□□ 0.94
MMP12P39900 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.91■□□□□ 0.94
MMP12P39900 AC068338.2-201ENST00000563278 1430 ntBASIC20.91■□□□□ 0.94
MMP12P39900 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.91■□□□□ 0.94
MMP12P39900 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.91■□□□□ 0.94
MMP12P39900 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MMP12P39900 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.91■□□□□ 0.94
MMP12P39900 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.9■□□□□ 0.94
MMP12P39900 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MMP12P39900 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MMP12P39900 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.9■□□□□ 0.94
MMP12P39900 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MMP12P39900 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MMP12P39900 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MMP12P39900 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MMP12P39900 HLA-L-209ENST00000420110 1011 ntBASIC20.9■□□□□ 0.94
MMP12P39900 CYP2T1P-201ENST00000432607 1285 ntBASIC20.9■□□□□ 0.94
MMP12P39900 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MMP12P39900 AC245052.3-201ENST00000450182 901 ntBASIC20.9■□□□□ 0.94
MMP12P39900 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.9■□□□□ 0.94
MMP12P39900 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.9■□□□□ 0.94
MMP12P39900 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MMP12P39900 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.9■□□□□ 0.94
MMP12P39900 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MMP12P39900 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MMP12P39900 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MMP12P39900 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MMP12P39900 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.89■□□□□ 0.94
MMP12P39900 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
MMP12P39900 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
MMP12P39900 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
MMP12P39900 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MMP12P39900 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
MMP12P39900 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
MMP12P39900 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.89■□□□□ 0.93
MMP12P39900 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.89■□□□□ 0.93
MMP12P39900 AC244015.2-201ENST00000616358 1861 ntBASIC20.89■□□□□ 0.93
MMP12P39900 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MMP12P39900 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
MMP12P39900 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
MMP12P39900 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.89■□□□□ 0.93
MMP12P39900 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MMP12P39900 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MMP12P39900 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.88■□□□□ 0.93
MMP12P39900 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MMP12P39900 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MMP12P39900 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
MMP12P39900 FBXW4P1-201ENST00000426721 2239 ntBASIC20.88■□□□□ 0.93
MMP12P39900 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.88■□□□□ 0.93
MMP12P39900 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.88■□□□□ 0.93
MMP12P39900 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.88■□□□□ 0.93
MMP12P39900 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MMP12P39900 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MMP12P39900 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.88■□□□□ 0.93
MMP12P39900 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
MMP12P39900 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.88■□□□□ 0.93
MMP12P39900 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
MMP12P39900 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms