Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RPL3P39023 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.87■□□□□ 0.77
RPL3P39023 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.87■□□□□ 0.77
RPL3P39023 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPL3P39023 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.87■□□□□ 0.77
RPL3P39023 AL358852.1-201ENST00000623174 1268 ntBASIC19.87■□□□□ 0.77
RPL3P39023 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RPL3P39023 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.86■□□□□ 0.77
RPL3P39023 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPL3P39023 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RPL3P39023 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RPL3P39023 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPL3P39023 SUDS3P1-201ENST00000505831 966 ntBASIC19.86■□□□□ 0.77
RPL3P39023 AC053503.5-201ENST00000601508 636 ntBASIC19.86■□□□□ 0.77
RPL3P39023 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RPL3P39023 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RPL3P39023 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.86■□□□□ 0.77
RPL3P39023 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
RPL3P39023 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPL3P39023 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPL3P39023 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPL3P39023 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RPL3P39023 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPL3P39023 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPL3P39023 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPL3P39023 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPL3P39023 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RPL3P39023 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPL3P39023 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPL3P39023 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.85■□□□□ 0.77
RPL3P39023 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPL3P39023 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RPL3P39023 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.85■□□□□ 0.77
RPL3P39023 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.85■□□□□ 0.77
RPL3P39023 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
RPL3P39023 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.85■□□□□ 0.77
RPL3P39023 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPL3P39023 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.85■□□□□ 0.77
RPL3P39023 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPL3P39023 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPL3P39023 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RPL3P39023 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPL3P39023 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RPL3P39023 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPL3P39023 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.84■□□□□ 0.77
RPL3P39023 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPL3P39023 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.84■□□□□ 0.77
RPL3P39023 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RPL3P39023 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RPL3P39023 EEF1DP3-203ENST00000566025 782 ntBASIC19.84■□□□□ 0.77
RPL3P39023 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.84■□□□□ 0.77
RPL3P39023 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.84■□□□□ 0.77
RPL3P39023 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.84■□□□□ 0.77
RPL3P39023 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RPL3P39023 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPL3P39023 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPL3P39023 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
RPL3P39023 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
RPL3P39023 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.84■□□□□ 0.77
RPL3P39023 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPL3P39023 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPL3P39023 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPL3P39023 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPL3P39023 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
RPL3P39023 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.83■□□□□ 0.77
RPL3P39023 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPL3P39023 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPL3P39023 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPL3P39023 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RPL3P39023 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.83■□□□□ 0.77
RPL3P39023 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.83■□□□□ 0.77
RPL3P39023 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPL3P39023 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.83■□□□□ 0.77
RPL3P39023 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.83■□□□□ 0.77
RPL3P39023 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.83■□□□□ 0.76
RPL3P39023 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RPL3P39023 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RPL3P39023 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RPL3P39023 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RPL3P39023 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.83■□□□□ 0.76
RPL3P39023 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.83■□□□□ 0.76
RPL3P39023 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPL3P39023 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPL3P39023 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.82■□□□□ 0.76
RPL3P39023 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
RPL3P39023 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPL3P39023 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.82■□□□□ 0.76
RPL3P39023 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RPL3P39023 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RPL3P39023 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPL3P39023 AC142381.2-201ENST00000566120 298 ntBASIC19.82■□□□□ 0.76
RPL3P39023 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPL3P39023 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
RPL3P39023 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.82■□□□□ 0.76
RPL3P39023 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.82■□□□□ 0.76
RPL3P39023 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPL3P39023 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPL3P39023 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPL3P39023 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
RPL3P39023 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms