Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RORAP35398 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RORAP35398 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.93■□□□□ 0.78
RORAP35398 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.93■□□□□ 0.78
RORAP35398 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RORAP35398 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RORAP35398 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RORAP35398 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RORAP35398 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RORAP35398 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RORAP35398 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RORAP35398 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RORAP35398 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RORAP35398 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RORAP35398 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RORAP35398 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.92■□□□□ 0.78
RORAP35398 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.92■□□□□ 0.78
RORAP35398 AC105036.2-201ENST00000569468 176 ntBASIC19.92■□□□□ 0.78
RORAP35398 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RORAP35398 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.92■□□□□ 0.78
RORAP35398 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RORAP35398 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RORAP35398 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.91■□□□□ 0.78
RORAP35398 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
RORAP35398 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.91■□□□□ 0.78
RORAP35398 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RORAP35398 SLC29A4P1-201ENST00000398760 971 ntBASIC19.91■□□□□ 0.78
RORAP35398 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.91■□□□□ 0.78
RORAP35398 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.91■□□□□ 0.78
RORAP35398 AL138781.1-201ENST00000566567 1274 ntBASIC19.91■□□□□ 0.78
RORAP35398 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RORAP35398 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RORAP35398 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RORAP35398 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.91■□□□□ 0.78
RORAP35398 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RORAP35398 AC061975.6-201ENST00000579045 1553 ntBASIC19.91■□□□□ 0.78
RORAP35398 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RORAP35398 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RORAP35398 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RORAP35398 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RORAP35398 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.9■□□□□ 0.78
RORAP35398 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RORAP35398 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RORAP35398 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RORAP35398 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RORAP35398 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RORAP35398 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.9■□□□□ 0.78
RORAP35398 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.9■□□□□ 0.78
RORAP35398 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RORAP35398 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.9■□□□□ 0.78
RORAP35398 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RORAP35398 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
RORAP35398 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.9■□□□□ 0.78
RORAP35398 RBM17P2-201ENST00000616397 1405 ntBASIC19.9■□□□□ 0.78
RORAP35398 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RORAP35398 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
RORAP35398 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.9■□□□□ 0.78
RORAP35398 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RORAP35398 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RORAP35398 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RORAP35398 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RORAP35398 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RORAP35398 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.89■□□□□ 0.77
RORAP35398 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RORAP35398 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RORAP35398 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RORAP35398 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.89■□□□□ 0.77
RORAP35398 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.89■□□□□ 0.77
RORAP35398 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
RORAP35398 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.89■□□□□ 0.77
RORAP35398 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.89■□□□□ 0.77
RORAP35398 AC026471.6-201ENST00000622954 1905 ntBASIC19.89■□□□□ 0.77
RORAP35398 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.89■□□□□ 0.77
RORAP35398 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RORAP35398 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RORAP35398 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RORAP35398 FAM99A-202ENST00000538190 1989 ntBASIC19.88■□□□□ 0.77
RORAP35398 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.88■□□□□ 0.77
RORAP35398 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RORAP35398 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RORAP35398 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RORAP35398 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.88■□□□□ 0.77
RORAP35398 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.88■□□□□ 0.77
RORAP35398 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.88■□□□□ 0.77
RORAP35398 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.88■□□□□ 0.77
RORAP35398 AC243732.1-201ENST00000612648 864 ntBASIC19.88■□□□□ 0.77
RORAP35398 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.88■□□□□ 0.77
RORAP35398 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RORAP35398 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RORAP35398 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RORAP35398 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.88■□□□□ 0.77
RORAP35398 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RORAP35398 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RORAP35398 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RORAP35398 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
RORAP35398 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RORAP35398 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RORAP35398 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RORAP35398 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
RORAP35398 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms