Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN6P29350 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN6P29350 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN6P29350 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN6P29350 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN6P29350 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPN6P29350 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.88■□□□□ 0.77
PTPN6P29350 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.88■□□□□ 0.77
PTPN6P29350 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
PTPN6P29350 RARRES2P6-201ENST00000567333 442 ntBASIC19.88■□□□□ 0.77
PTPN6P29350 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.88■□□□□ 0.77
PTPN6P29350 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN6P29350 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN6P29350 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN6P29350 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN6P29350 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
PTPN6P29350 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPN6P29350 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN6P29350 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.88■□□□□ 0.77
PTPN6P29350 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN6P29350 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN6P29350 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PTPN6P29350 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN6P29350 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN6P29350 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PTPN6P29350 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN6P29350 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
PTPN6P29350 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.87■□□□□ 0.77
PTPN6P29350 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.87■□□□□ 0.77
PTPN6P29350 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.87■□□□□ 0.77
PTPN6P29350 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN6P29350 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN6P29350 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.87■□□□□ 0.77
PTPN6P29350 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.87■□□□□ 0.77
PTPN6P29350 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN6P29350 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PTPN6P29350 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.86■□□□□ 0.77
PTPN6P29350 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.86■□□□□ 0.77
PTPN6P29350 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN6P29350 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN6P29350 AC026271.2-201ENST00000428091 497 ntBASIC19.86■□□□□ 0.77
PTPN6P29350 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.86■□□□□ 0.77
PTPN6P29350 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.86■□□□□ 0.77
PTPN6P29350 AL358852.1-201ENST00000623174 1268 ntBASIC19.86■□□□□ 0.77
PTPN6P29350 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PTPN6P29350 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN6P29350 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.86■□□□□ 0.77
PTPN6P29350 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN6P29350 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN6P29350 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN6P29350 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.85■□□□□ 0.77
PTPN6P29350 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
PTPN6P29350 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN6P29350 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.85■□□□□ 0.77
PTPN6P29350 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PTPN6P29350 PLK5-205ENST00000642079 1969 ntBASIC19.85■□□□□ 0.77
PTPN6P29350 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN6P29350 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN6P29350 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.85■□□□□ 0.77
PTPN6P29350 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN6P29350 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.85■□□□□ 0.77
PTPN6P29350 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.85■□□□□ 0.77
PTPN6P29350 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.85■□□□□ 0.77
PTPN6P29350 AC012414.1-201ENST00000556676 535 ntBASIC19.85■□□□□ 0.77
PTPN6P29350 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.85■□□□□ 0.77
PTPN6P29350 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.85■□□□□ 0.77
PTPN6P29350 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.85■□□□□ 0.77
PTPN6P29350 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN6P29350 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
PTPN6P29350 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN6P29350 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN6P29350 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PTPN6P29350 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN6P29350 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN6P29350 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN6P29350 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN6P29350 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.85■□□□□ 0.77
PTPN6P29350 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN6P29350 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN6P29350 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.84■□□□□ 0.77
PTPN6P29350 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN6P29350 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.84■□□□□ 0.77
PTPN6P29350 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
PTPN6P29350 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.84■□□□□ 0.77
PTPN6P29350 AL354811.1-201ENST00000610286 706 ntBASIC19.84■□□□□ 0.77
PTPN6P29350 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
PTPN6P29350 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN6P29350 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN6P29350 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.84■□□□□ 0.77
PTPN6P29350 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN6P29350 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN6P29350 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN6P29350 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN6P29350 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.83■□□□□ 0.77
PTPN6P29350 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPN6P29350 AC055733.4-201ENST00000638462 1354 ntBASIC19.83■□□□□ 0.77
PTPN6P29350 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.83■□□□□ 0.77
PTPN6P29350 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PTPN6P29350 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPN6P29350 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms