Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.69■□□□□ 0.9
LAMA1P25391 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.69■□□□□ 0.9
LAMA1P25391 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LAMA1P25391 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LAMA1P25391 RCN1P1-201ENST00000400413 996 ntBASIC20.69■□□□□ 0.9
LAMA1P25391 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LAMA1P25391 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.69■□□□□ 0.9
LAMA1P25391 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
LAMA1P25391 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LAMA1P25391 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LAMA1P25391 RPPH1-201ENST00000516869 333 ntBASIC20.69■□□□□ 0.9
LAMA1P25391 AC010331.1-201ENST00000611423 582 ntBASIC20.69■□□□□ 0.9
LAMA1P25391 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LAMA1P25391 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
LAMA1P25391 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LAMA1P25391 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LAMA1P25391 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
LAMA1P25391 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LAMA1P25391 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LAMA1P25391 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LAMA1P25391 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.68■□□□□ 0.9
LAMA1P25391 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LAMA1P25391 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.68■□□□□ 0.9
LAMA1P25391 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.68■□□□□ 0.9
LAMA1P25391 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LAMA1P25391 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
LAMA1P25391 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.67■□□□□ 0.9
LAMA1P25391 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LAMA1P25391 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LAMA1P25391 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LAMA1P25391 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.67■□□□□ 0.9
LAMA1P25391 AL034346.1-201ENST00000568244 1277 ntBASIC20.67■□□□□ 0.9
LAMA1P25391 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.67■□□□□ 0.9
LAMA1P25391 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LAMA1P25391 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.67■□□□□ 0.9
LAMA1P25391 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LAMA1P25391 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.67■□□□□ 0.9
LAMA1P25391 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
LAMA1P25391 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.67■□□□□ 0.9
LAMA1P25391 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.67■□□□□ 0.9
LAMA1P25391 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LAMA1P25391 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LAMA1P25391 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.67■□□□□ 0.9
LAMA1P25391 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.67■□□□□ 0.9
LAMA1P25391 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
LAMA1P25391 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LAMA1P25391 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LAMA1P25391 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.67■□□□□ 0.9
LAMA1P25391 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.67■□□□□ 0.9
LAMA1P25391 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.66■□□□□ 0.9
LAMA1P25391 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LAMA1P25391 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LAMA1P25391 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LAMA1P25391 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.66■□□□□ 0.9
LAMA1P25391 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.66■□□□□ 0.9
LAMA1P25391 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LAMA1P25391 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.66■□□□□ 0.9
LAMA1P25391 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.66■□□□□ 0.9
LAMA1P25391 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LAMA1P25391 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.66■□□□□ 0.9
LAMA1P25391 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LAMA1P25391 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.65■□□□□ 0.9
LAMA1P25391 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LAMA1P25391 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.65■□□□□ 0.9
LAMA1P25391 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.65■□□□□ 0.9
LAMA1P25391 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
LAMA1P25391 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LAMA1P25391 SNORA78-201ENST00000459373 127 ntBASIC20.65■□□□□ 0.9
LAMA1P25391 AL359736.2-201ENST00000621992 437 ntBASIC20.65■□□□□ 0.9
LAMA1P25391 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LAMA1P25391 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.64■□□□□ 0.9
LAMA1P25391 KRT18P21-201ENST00000515767 1272 ntBASIC20.64■□□□□ 0.9
LAMA1P25391 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
LAMA1P25391 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LAMA1P25391 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
LAMA1P25391 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.64■□□□□ 0.89
LAMA1P25391 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.64■□□□□ 0.89
LAMA1P25391 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LAMA1P25391 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.64■□□□□ 0.89
LAMA1P25391 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
LAMA1P25391 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LAMA1P25391 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LAMA1P25391 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.64■□□□□ 0.89
LAMA1P25391 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
LAMA1P25391 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LAMA1P25391 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
LAMA1P25391 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.63■□□□□ 0.89
LAMA1P25391 C11orf96-202ENST00000528572 1834 ntBASIC20.63■□□□□ 0.89
LAMA1P25391 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LAMA1P25391 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LAMA1P25391 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.63■□□□□ 0.89
LAMA1P25391 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.63■□□□□ 0.89
LAMA1P25391 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
LAMA1P25391 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.63■□□□□ 0.89
LAMA1P25391 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
LAMA1P25391 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LAMA1P25391 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
LAMA1P25391 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LAMA1P25391 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
LAMA1P25391 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms