Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCL1P22362 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.08■□□□□ 0.48
CCL1P22362 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.08■□□□□ 0.48
CCL1P22362 AC073130.3-201ENST00000624389 2278 ntBASIC18.08■□□□□ 0.48
CCL1P22362 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCL1P22362 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
CCL1P22362 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CCL1P22362 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCL1P22362 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCL1P22362 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCL1P22362 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CCL1P22362 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCL1P22362 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCL1P22362 AC121338.2-201ENST00000622535 1744 ntBASIC18.07■□□□□ 0.48
CCL1P22362 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
CCL1P22362 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCL1P22362 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCL1P22362 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCL1P22362 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.07■□□□□ 0.48
CCL1P22362 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.07■□□□□ 0.48
CCL1P22362 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.07■□□□□ 0.48
CCL1P22362 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.07■□□□□ 0.48
CCL1P22362 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCL1P22362 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.07■□□□□ 0.48
CCL1P22362 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.07■□□□□ 0.48
CCL1P22362 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.07■□□□□ 0.48
CCL1P22362 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.07■□□□□ 0.48
CCL1P22362 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCL1P22362 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCL1P22362 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCL1P22362 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.07■□□□□ 0.48
CCL1P22362 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.06■□□□□ 0.48
CCL1P22362 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.06■□□□□ 0.48
CCL1P22362 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCL1P22362 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CCL1P22362 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCL1P22362 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCL1P22362 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCL1P22362 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCL1P22362 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CCL1P22362 TPRG1LP1-201ENST00000598702 760 ntBASIC18.06■□□□□ 0.48
CCL1P22362 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.06■□□□□ 0.48
CCL1P22362 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.06■□□□□ 0.48
CCL1P22362 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCL1P22362 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCL1P22362 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCL1P22362 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCL1P22362 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
CCL1P22362 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCL1P22362 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCL1P22362 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CCL1P22362 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCL1P22362 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCL1P22362 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCL1P22362 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCL1P22362 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CCL1P22362 PKD1P6-201ENST00000343738 4769 ntBASIC18.05■□□□□ 0.48
CCL1P22362 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.05■□□□□ 0.48
CCL1P22362 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCL1P22362 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCL1P22362 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCL1P22362 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCL1P22362 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCL1P22362 SUDS3P1-201ENST00000505831 966 ntBASIC18.05■□□□□ 0.48
CCL1P22362 AL354811.1-201ENST00000610286 706 ntBASIC18.05■□□□□ 0.48
CCL1P22362 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCL1P22362 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCL1P22362 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.05■□□□□ 0.48
CCL1P22362 GABARAPL3-202ENST00000624044 1851 ntBASIC18.05■□□□□ 0.48
CCL1P22362 LINC01006-201ENST00000333319 2292 ntBASIC18.05■□□□□ 0.48
CCL1P22362 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCL1P22362 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.04■□□□□ 0.48
CCL1P22362 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.04■□□□□ 0.48
CCL1P22362 AP005212.1-201ENST00000581547 1997 ntBASIC18.04■□□□□ 0.48
CCL1P22362 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.04■□□□□ 0.48
CCL1P22362 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCL1P22362 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.04■□□□□ 0.48
CCL1P22362 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCL1P22362 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCL1P22362 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.04■□□□□ 0.48
CCL1P22362 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCL1P22362 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCL1P22362 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCL1P22362 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.03■□□□□ 0.48
CCL1P22362 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCL1P22362 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCL1P22362 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCL1P22362 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCL1P22362 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCL1P22362 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCL1P22362 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCL1P22362 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.03■□□□□ 0.48
CCL1P22362 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCL1P22362 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.03■□□□□ 0.48
CCL1P22362 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CCL1P22362 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCL1P22362 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.03■□□□□ 0.48
CCL1P22362 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CCL1P22362 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.03■□□□□ 0.48
CCL1P22362 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms