Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPS4Y1P22090 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.23■□□□□ 0.67
RPS4Y1P22090 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RPS4Y1P22090 AP004607.4-201ENST00000530158 1459 ntBASIC19.22■□□□□ 0.67
RPS4Y1P22090 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RPS4Y1P22090 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RPS4Y1P22090 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RPS4Y1P22090 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RPS4Y1P22090 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPS4Y1P22090 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.22■□□□□ 0.67
RPS4Y1P22090 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.22■□□□□ 0.67
RPS4Y1P22090 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.22■□□□□ 0.67
RPS4Y1P22090 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPS4Y1P22090 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RPS4Y1P22090 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RPS4Y1P22090 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RPS4Y1P22090 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPS4Y1P22090 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RPS4Y1P22090 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.22■□□□□ 0.67
RPS4Y1P22090 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.22■□□□□ 0.67
RPS4Y1P22090 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.22■□□□□ 0.67
RPS4Y1P22090 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPS4Y1P22090 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.21■□□□□ 0.67
RPS4Y1P22090 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPS4Y1P22090 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPS4Y1P22090 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.21■□□□□ 0.67
RPS4Y1P22090 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.21■□□□□ 0.67
RPS4Y1P22090 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPS4Y1P22090 POU5F1P4-201ENST00000413175 1085 ntBASIC19.21■□□□□ 0.67
RPS4Y1P22090 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RPS4Y1P22090 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RPS4Y1P22090 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.21■□□□□ 0.67
RPS4Y1P22090 YBX1P1-201ENST00000445822 960 ntBASIC19.21■□□□□ 0.67
RPS4Y1P22090 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.21■□□□□ 0.67
RPS4Y1P22090 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.21■□□□□ 0.67
RPS4Y1P22090 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
RPS4Y1P22090 TERF1P2-201ENST00000583350 1212 ntBASIC19.21■□□□□ 0.67
RPS4Y1P22090 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.21■□□□□ 0.67
RPS4Y1P22090 PLK5-205ENST00000642079 1969 ntBASIC19.21■□□□□ 0.67
RPS4Y1P22090 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPS4Y1P22090 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RPS4Y1P22090 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPS4Y1P22090 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPS4Y1P22090 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPS4Y1P22090 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPS4Y1P22090 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.2■□□□□ 0.66
RPS4Y1P22090 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.2■□□□□ 0.66
RPS4Y1P22090 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.2■□□□□ 0.66
RPS4Y1P22090 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RPS4Y1P22090 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.2■□□□□ 0.66
RPS4Y1P22090 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.2■□□□□ 0.66
RPS4Y1P22090 AC006128.1-201ENST00000624704 1661 ntBASIC19.2■□□□□ 0.66
RPS4Y1P22090 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPS4Y1P22090 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.2■□□□□ 0.66
RPS4Y1P22090 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPS4Y1P22090 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPS4Y1P22090 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
RPS4Y1P22090 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPS4Y1P22090 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RPS4Y1P22090 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPS4Y1P22090 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.19■□□□□ 0.66
RPS4Y1P22090 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPS4Y1P22090 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.19■□□□□ 0.66
RPS4Y1P22090 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.19■□□□□ 0.66
RPS4Y1P22090 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.19■□□□□ 0.66
RPS4Y1P22090 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.19■□□□□ 0.66
RPS4Y1P22090 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.19■□□□□ 0.66
RPS4Y1P22090 AC008175.2-201ENST00000612840 297 ntBASIC19.19■□□□□ 0.66
RPS4Y1P22090 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPS4Y1P22090 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.19■□□□□ 0.66
RPS4Y1P22090 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPS4Y1P22090 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.19■□□□□ 0.66
RPS4Y1P22090 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.19■□□□□ 0.66
RPS4Y1P22090 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
RPS4Y1P22090 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPS4Y1P22090 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPS4Y1P22090 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPS4Y1P22090 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RPS4Y1P22090 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPS4Y1P22090 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.18■□□□□ 0.66
RPS4Y1P22090 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPS4Y1P22090 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPS4Y1P22090 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPS4Y1P22090 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.18■□□□□ 0.66
RPS4Y1P22090 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RPS4Y1P22090 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPS4Y1P22090 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.18■□□□□ 0.66
RPS4Y1P22090 AC010141.2-201ENST00000452426 721 ntBASIC19.18■□□□□ 0.66
RPS4Y1P22090 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPS4Y1P22090 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.18■□□□□ 0.66
RPS4Y1P22090 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPS4Y1P22090 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.18■□□□□ 0.66
RPS4Y1P22090 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPS4Y1P22090 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPS4Y1P22090 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.18■□□□□ 0.66
RPS4Y1P22090 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4Y1P22090 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RPS4Y1P22090 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RPS4Y1P22090 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4Y1P22090 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms