Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
KRT4P19013 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT4P19013 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT4P19013 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT4P19013 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.01■□□□□ 0.95
KRT4P19013 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.01■□□□□ 0.95
KRT4P19013 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT4P19013 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.01■□□□□ 0.95
KRT4P19013 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.01■□□□□ 0.95
KRT4P19013 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
KRT4P19013 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
KRT4P19013 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
KRT4P19013 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
KRT4P19013 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT4P19013 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT4P19013 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21■□□□□ 0.95
KRT4P19013 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21■□□□□ 0.95
KRT4P19013 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
KRT4P19013 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21■□□□□ 0.95
KRT4P19013 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21■□□□□ 0.95
KRT4P19013 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21■□□□□ 0.95
KRT4P19013 AL356740.2-201ENST00000601559 647 ntBASIC21■□□□□ 0.95
KRT4P19013 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT4P19013 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
KRT4P19013 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21■□□□□ 0.95
KRT4P19013 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
KRT4P19013 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT4P19013 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21■□□□□ 0.95
KRT4P19013 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KRT4P19013 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT4P19013 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT4P19013 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT4P19013 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT4P19013 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT4P19013 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.99■□□□□ 0.95
KRT4P19013 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
KRT4P19013 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KRT4P19013 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.99■□□□□ 0.95
KRT4P19013 AC092171.4-201ENST00000609130 632 ntBASIC20.99■□□□□ 0.95
KRT4P19013 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.99■□□□□ 0.95
KRT4P19013 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.99■□□□□ 0.95
KRT4P19013 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT4P19013 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.99■□□□□ 0.95
KRT4P19013 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT4P19013 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
KRT4P19013 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT4P19013 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.98■□□□□ 0.95
KRT4P19013 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT4P19013 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KRT4P19013 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
KRT4P19013 SRD5A1P1-201ENST00000442297 786 ntBASIC20.98■□□□□ 0.95
KRT4P19013 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
KRT4P19013 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KRT4P19013 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
KRT4P19013 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT4P19013 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
KRT4P19013 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
KRT4P19013 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KRT4P19013 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.97■□□□□ 0.95
KRT4P19013 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
KRT4P19013 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KRT4P19013 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
KRT4P19013 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
KRT4P19013 AC007952.6-201ENST00000573168 2673 ntBASIC20.97■□□□□ 0.95
KRT4P19013 AC003957.1-201ENST00000625108 2673 ntBASIC20.97■□□□□ 0.95
KRT4P19013 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KRT4P19013 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
KRT4P19013 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KRT4P19013 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KRT4P19013 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
KRT4P19013 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
KRT4P19013 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.96■□□□□ 0.95
KRT4P19013 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT4P19013 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT4P19013 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KRT4P19013 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KRT4P19013 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KRT4P19013 MIR3621-201ENST00000580529 85 ntBASIC20.96■□□□□ 0.95
KRT4P19013 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.96■□□□□ 0.95
KRT4P19013 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
KRT4P19013 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
KRT4P19013 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KRT4P19013 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
KRT4P19013 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.96■□□□□ 0.95
KRT4P19013 AFG3L1P-217ENST00000557444 2447 ntBASIC20.96■□□□□ 0.95
KRT4P19013 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
KRT4P19013 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
KRT4P19013 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.95■□□□□ 0.95
KRT4P19013 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT4P19013 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.95■□□□□ 0.94
KRT4P19013 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT4P19013 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.95■□□□□ 0.94
KRT4P19013 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
KRT4P19013 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT4P19013 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT4P19013 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
KRT4P19013 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.95■□□□□ 0.94
KRT4P19013 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT4P19013 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT4P19013 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms