Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBL4AP11441 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.35■□□□□ 0.69
UBL4AP11441 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBL4AP11441 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBL4AP11441 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBL4AP11441 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBL4AP11441 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBL4AP11441 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBL4AP11441 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.34■□□□□ 0.69
UBL4AP11441 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.34■□□□□ 0.69
UBL4AP11441 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBL4AP11441 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBL4AP11441 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.34■□□□□ 0.69
UBL4AP11441 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.34■□□□□ 0.69
UBL4AP11441 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
UBL4AP11441 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBL4AP11441 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBL4AP11441 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBL4AP11441 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBL4AP11441 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBL4AP11441 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBL4AP11441 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.34■□□□□ 0.69
UBL4AP11441 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.34■□□□□ 0.69
UBL4AP11441 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.34■□□□□ 0.69
UBL4AP11441 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBL4AP11441 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.34■□□□□ 0.69
UBL4AP11441 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBL4AP11441 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.34■□□□□ 0.69
UBL4AP11441 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBL4AP11441 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBL4AP11441 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBL4AP11441 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBL4AP11441 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
UBL4AP11441 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBL4AP11441 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
UBL4AP11441 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBL4AP11441 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBL4AP11441 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
UBL4AP11441 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
UBL4AP11441 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.33■□□□□ 0.68
UBL4AP11441 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.33■□□□□ 0.68
UBL4AP11441 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.33■□□□□ 0.68
UBL4AP11441 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBL4AP11441 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBL4AP11441 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
UBL4AP11441 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.33■□□□□ 0.68
UBL4AP11441 AC073130.3-201ENST00000624389 2278 ntBASIC19.32■□□□□ 0.68
UBL4AP11441 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
UBL4AP11441 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBL4AP11441 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBL4AP11441 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBL4AP11441 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBL4AP11441 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.32■□□□□ 0.68
UBL4AP11441 KRT87P-202ENST00000534226 1464 ntBASIC19.32■□□□□ 0.68
UBL4AP11441 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBL4AP11441 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
UBL4AP11441 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBL4AP11441 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.32■□□□□ 0.68
UBL4AP11441 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.31■□□□□ 0.68
UBL4AP11441 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBL4AP11441 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBL4AP11441 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.31■□□□□ 0.68
UBL4AP11441 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBL4AP11441 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UBL4AP11441 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBL4AP11441 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
UBL4AP11441 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.31■□□□□ 0.68
UBL4AP11441 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.31■□□□□ 0.68
UBL4AP11441 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.31■□□□□ 0.68
UBL4AP11441 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.31■□□□□ 0.68
UBL4AP11441 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBL4AP11441 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.31■□□□□ 0.68
UBL4AP11441 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
UBL4AP11441 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.31■□□□□ 0.68
UBL4AP11441 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.31■□□□□ 0.68
UBL4AP11441 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
UBL4AP11441 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.31■□□□□ 0.68
UBL4AP11441 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBL4AP11441 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBL4AP11441 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UBL4AP11441 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBL4AP11441 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBL4AP11441 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBL4AP11441 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.3■□□□□ 0.68
UBL4AP11441 EEF1DP3-203ENST00000566025 782 ntBASIC19.3■□□□□ 0.68
UBL4AP11441 AC053503.5-201ENST00000601508 636 ntBASIC19.3■□□□□ 0.68
UBL4AP11441 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.3■□□□□ 0.68
UBL4AP11441 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.3■□□□□ 0.68
UBL4AP11441 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.3■□□□□ 0.68
UBL4AP11441 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
UBL4AP11441 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
UBL4AP11441 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.3■□□□□ 0.68
UBL4AP11441 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBL4AP11441 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBL4AP11441 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBL4AP11441 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.3■□□□□ 0.68
UBL4AP11441 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBL4AP11441 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBL4AP11441 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UBL4AP11441 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms