Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.18■□□□□ 0.82
CCNYL3P0C7X3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.18■□□□□ 0.82
CCNYL3P0C7X3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.18■□□□□ 0.82
CCNYL3P0C7X3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.18■□□□□ 0.82
CCNYL3P0C7X3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.18■□□□□ 0.82
CCNYL3P0C7X3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.18■□□□□ 0.82
CCNYL3P0C7X3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCNYL3P0C7X3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCNYL3P0C7X3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCNYL3P0C7X3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCNYL3P0C7X3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCNYL3P0C7X3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCNYL3P0C7X3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCNYL3P0C7X3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.17■□□□□ 0.82
CCNYL3P0C7X3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCNYL3P0C7X3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCNYL3P0C7X3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCNYL3P0C7X3 SLC25A24-204ENST00000569674 2357 ntBASIC20.17■□□□□ 0.82
CCNYL3P0C7X3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCNYL3P0C7X3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCNYL3P0C7X3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
CCNYL3P0C7X3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCNYL3P0C7X3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCNYL3P0C7X3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCNYL3P0C7X3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.16■□□□□ 0.82
CCNYL3P0C7X3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
CCNYL3P0C7X3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCNYL3P0C7X3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.16■□□□□ 0.82
CCNYL3P0C7X3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCNYL3P0C7X3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCNYL3P0C7X3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.16■□□□□ 0.82
CCNYL3P0C7X3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCNYL3P0C7X3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCNYL3P0C7X3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCNYL3P0C7X3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCNYL3P0C7X3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CCNYL3P0C7X3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.16■□□□□ 0.82
CCNYL3P0C7X3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCNYL3P0C7X3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCNYL3P0C7X3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCNYL3P0C7X3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
CCNYL3P0C7X3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCNYL3P0C7X3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.15■□□□□ 0.82
CCNYL3P0C7X3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCNYL3P0C7X3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCNYL3P0C7X3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCNYL3P0C7X3 SLC29A4P1-201ENST00000398760 971 ntBASIC20.15■□□□□ 0.82
CCNYL3P0C7X3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CCNYL3P0C7X3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CCNYL3P0C7X3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCNYL3P0C7X3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.15■□□□□ 0.82
CCNYL3P0C7X3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CCNYL3P0C7X3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.15■□□□□ 0.82
CCNYL3P0C7X3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCNYL3P0C7X3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.15■□□□□ 0.82
CCNYL3P0C7X3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCNYL3P0C7X3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCNYL3P0C7X3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CCNYL3P0C7X3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCNYL3P0C7X3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCNYL3P0C7X3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCNYL3P0C7X3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCNYL3P0C7X3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCNYL3P0C7X3 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.14■□□□□ 0.81
CCNYL3P0C7X3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CCNYL3P0C7X3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.14■□□□□ 0.81
CCNYL3P0C7X3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCNYL3P0C7X3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCNYL3P0C7X3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCNYL3P0C7X3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCNYL3P0C7X3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCNYL3P0C7X3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCNYL3P0C7X3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.13■□□□□ 0.81
CCNYL3P0C7X3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCNYL3P0C7X3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCNYL3P0C7X3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCNYL3P0C7X3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.13■□□□□ 0.81
CCNYL3P0C7X3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.13■□□□□ 0.81
CCNYL3P0C7X3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.13■□□□□ 0.81
CCNYL3P0C7X3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCNYL3P0C7X3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.13■□□□□ 0.81
CCNYL3P0C7X3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCNYL3P0C7X3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.13■□□□□ 0.81
CCNYL3P0C7X3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.13■□□□□ 0.81
CCNYL3P0C7X3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCNYL3P0C7X3 AC010536.3-201ENST00000620306 533 ntBASIC20.13■□□□□ 0.81
CCNYL3P0C7X3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCNYL3P0C7X3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCNYL3P0C7X3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCNYL3P0C7X3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCNYL3P0C7X3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCNYL3P0C7X3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCNYL3P0C7X3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CCNYL3P0C7X3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCNYL3P0C7X3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.12■□□□□ 0.81
CCNYL3P0C7X3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCNYL3P0C7X3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.12■□□□□ 0.81
CCNYL3P0C7X3 TSPY6P-201ENST00000448518 926 ntBASIC20.12■□□□□ 0.81
CCNYL3P0C7X3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
CCNYL3P0C7X3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms