Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.76■□□□□ 0.59
MRPL3P09001 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MRPL3P09001 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
MRPL3P09001 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
MRPL3P09001 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.76■□□□□ 0.59
MRPL3P09001 DUX4L19-201ENST00000557448 1267 ntBASIC18.76■□□□□ 0.59
MRPL3P09001 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MRPL3P09001 AC011298.3-201ENST00000615796 283 ntBASIC18.76■□□□□ 0.59
MRPL3P09001 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MRPL3P09001 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MRPL3P09001 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MRPL3P09001 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.76■□□□□ 0.59
MRPL3P09001 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MRPL3P09001 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
MRPL3P09001 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MRPL3P09001 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
MRPL3P09001 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MRPL3P09001 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
MRPL3P09001 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.75■□□□□ 0.59
MRPL3P09001 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MRPL3P09001 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
MRPL3P09001 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MRPL3P09001 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MRPL3P09001 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MRPL3P09001 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.75■□□□□ 0.59
MRPL3P09001 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.75■□□□□ 0.59
MRPL3P09001 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.75■□□□□ 0.59
MRPL3P09001 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.75■□□□□ 0.59
MRPL3P09001 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
MRPL3P09001 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.75■□□□□ 0.59
MRPL3P09001 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.75■□□□□ 0.59
MRPL3P09001 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
MRPL3P09001 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
MRPL3P09001 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.74■□□□□ 0.59
MRPL3P09001 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MRPL3P09001 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MRPL3P09001 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MRPL3P09001 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
MRPL3P09001 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
MRPL3P09001 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MRPL3P09001 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
MRPL3P09001 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.74■□□□□ 0.59
MRPL3P09001 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MRPL3P09001 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MRPL3P09001 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
MRPL3P09001 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MRPL3P09001 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
MRPL3P09001 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MRPL3P09001 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MRPL3P09001 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MRPL3P09001 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MRPL3P09001 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
MRPL3P09001 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MRPL3P09001 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MRPL3P09001 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MRPL3P09001 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MRPL3P09001 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.74■□□□□ 0.59
MRPL3P09001 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.73■□□□□ 0.59
MRPL3P09001 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MRPL3P09001 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.73■□□□□ 0.59
MRPL3P09001 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
MRPL3P09001 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
MRPL3P09001 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.73■□□□□ 0.59
MRPL3P09001 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MRPL3P09001 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MRPL3P09001 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.73■□□□□ 0.59
MRPL3P09001 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MRPL3P09001 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.73■□□□□ 0.59
MRPL3P09001 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
MRPL3P09001 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MRPL3P09001 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.73■□□□□ 0.59
MRPL3P09001 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.73■□□□□ 0.59
MRPL3P09001 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MRPL3P09001 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
MRPL3P09001 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MRPL3P09001 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
MRPL3P09001 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
MRPL3P09001 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MRPL3P09001 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.72■□□□□ 0.59
MRPL3P09001 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
MRPL3P09001 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MRPL3P09001 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
MRPL3P09001 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MRPL3P09001 PLK5-205ENST00000642079 1969 ntBASIC18.72■□□□□ 0.59
MRPL3P09001 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
MRPL3P09001 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
MRPL3P09001 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.72■□□□□ 0.59
MRPL3P09001 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.72■□□□□ 0.59
MRPL3P09001 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.72■□□□□ 0.59
MRPL3P09001 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.72■□□□□ 0.59
MRPL3P09001 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.72■□□□□ 0.59
MRPL3P09001 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.72■□□□□ 0.59
MRPL3P09001 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.72■□□□□ 0.59
MRPL3P09001 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MRPL3P09001 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
MRPL3P09001 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MRPL3P09001 AC006128.1-201ENST00000624704 1661 ntBASIC18.72■□□□□ 0.59
MRPL3P09001 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MRPL3P09001 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MRPL3P09001 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms