Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 pRNA.11-201ENST00000618423 90 ntBASIC17.64■□□□□ 0.41
CD74P04233 pRNA.13-201ENST00000619112 90 ntBASIC17.64■□□□□ 0.41
CD74P04233 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.64■□□□□ 0.41
CD74P04233 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD74P04233 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CD74P04233 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.64■□□□□ 0.41
CD74P04233 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CD74P04233 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.63■□□□□ 0.41
CD74P04233 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD74P04233 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.63■□□□□ 0.41
CD74P04233 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CD74P04233 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.63■□□□□ 0.41
CD74P04233 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CD74P04233 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.63■□□□□ 0.41
CD74P04233 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD74P04233 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD74P04233 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.63■□□□□ 0.41
CD74P04233 AP004607.7-201ENST00000527152 1677 ntBASIC17.63■□□□□ 0.41
CD74P04233 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CD74P04233 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.63■□□□□ 0.41
CD74P04233 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD74P04233 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.63■□□□□ 0.41
CD74P04233 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD74P04233 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.63■□□□□ 0.41
CD74P04233 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD74P04233 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD74P04233 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.63■□□□□ 0.41
CD74P04233 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CD74P04233 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD74P04233 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CD74P04233 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD74P04233 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CD74P04233 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD74P04233 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.62■□□□□ 0.41
CD74P04233 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD74P04233 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CD74P04233 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
CD74P04233 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD74P04233 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CD74P04233 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CD74P04233 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.62■□□□□ 0.41
CD74P04233 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.62■□□□□ 0.41
CD74P04233 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CD74P04233 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD74P04233 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD74P04233 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD74P04233 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.61■□□□□ 0.41
CD74P04233 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD74P04233 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD74P04233 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.61■□□□□ 0.41
CD74P04233 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD74P04233 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD74P04233 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD74P04233 AL117332.1-201ENST00000622628 974 ntBASIC17.61■□□□□ 0.41
CD74P04233 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CD74P04233 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.61■□□□□ 0.41
CD74P04233 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD74P04233 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD74P04233 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.61■□□□□ 0.41
CD74P04233 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CD74P04233 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.61■□□□□ 0.41
CD74P04233 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CD74P04233 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD74P04233 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.61■□□□□ 0.41
CD74P04233 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CD74P04233 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD74P04233 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD74P04233 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD74P04233 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD74P04233 AC006455.2-201ENST00000429931 906 ntBASIC17.6■□□□□ 0.41
CD74P04233 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.6■□□□□ 0.41
CD74P04233 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.6■□□□□ 0.41
CD74P04233 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CD74P04233 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD74P04233 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.6■□□□□ 0.41
CD74P04233 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD74P04233 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD74P04233 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD74P04233 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.6■□□□□ 0.41
CD74P04233 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD74P04233 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD74P04233 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD74P04233 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CD74P04233 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
CD74P04233 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.59■□□□□ 0.41
CD74P04233 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CD74P04233 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD74P04233 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.59■□□□□ 0.41
CD74P04233 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.59■□□□□ 0.41
CD74P04233 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD74P04233 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD74P04233 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD74P04233 AL512408.1-201ENST00000569378 2000 ntBASIC17.59■□□□□ 0.41
CD74P04233 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CD74P04233 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
CD74P04233 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.58■□□□□ 0.41
CD74P04233 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CD74P04233 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.41
CD74P04233 AP006587.3-201ENST00000525742 1516 ntBASIC17.58■□□□□ 0.41
CD74P04233 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms