Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT4O95628 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT4O95628 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT4O95628 RAP2CP1-201ENST00000605103 478 ntBASIC18.59■□□□□ 0.57
CNOT4O95628 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT4O95628 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT4O95628 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.59■□□□□ 0.57
CNOT4O95628 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT4O95628 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CNOT4O95628 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CNOT4O95628 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CNOT4O95628 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CNOT4O95628 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CNOT4O95628 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.58■□□□□ 0.57
CNOT4O95628 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CNOT4O95628 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.58■□□□□ 0.57
CNOT4O95628 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CNOT4O95628 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.58■□□□□ 0.56
CNOT4O95628 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CNOT4O95628 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CNOT4O95628 AC026185.1-201ENST00000445748 174 ntBASIC18.58■□□□□ 0.56
CNOT4O95628 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
CNOT4O95628 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.58■□□□□ 0.56
CNOT4O95628 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.58■□□□□ 0.56
CNOT4O95628 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.58■□□□□ 0.56
CNOT4O95628 UBE2DNL-204ENST00000602536 740 ntBASIC18.58■□□□□ 0.56
CNOT4O95628 AC011767.1-201ENST00000617410 1153 ntBASIC18.58■□□□□ 0.56
CNOT4O95628 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CNOT4O95628 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.58■□□□□ 0.56
CNOT4O95628 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.58■□□□□ 0.56
CNOT4O95628 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
CNOT4O95628 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CNOT4O95628 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CNOT4O95628 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CNOT4O95628 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.57■□□□□ 0.56
CNOT4O95628 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CNOT4O95628 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT4O95628 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT4O95628 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT4O95628 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT4O95628 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.57■□□□□ 0.56
CNOT4O95628 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT4O95628 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT4O95628 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CNOT4O95628 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CNOT4O95628 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.57■□□□□ 0.56
CNOT4O95628 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.57■□□□□ 0.56
CNOT4O95628 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.57■□□□□ 0.56
CNOT4O95628 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.57■□□□□ 0.56
CNOT4O95628 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.57■□□□□ 0.56
CNOT4O95628 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.57■□□□□ 0.56
CNOT4O95628 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT4O95628 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT4O95628 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT4O95628 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT4O95628 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT4O95628 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT4O95628 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT4O95628 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CNOT4O95628 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT4O95628 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT4O95628 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT4O95628 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.56■□□□□ 0.56
CNOT4O95628 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.56■□□□□ 0.56
CNOT4O95628 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.56■□□□□ 0.56
CNOT4O95628 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT4O95628 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT4O95628 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.56■□□□□ 0.56
CNOT4O95628 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.56■□□□□ 0.56
CNOT4O95628 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT4O95628 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT4O95628 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT4O95628 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT4O95628 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.56■□□□□ 0.56
CNOT4O95628 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT4O95628 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT4O95628 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT4O95628 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT4O95628 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT4O95628 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT4O95628 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.55■□□□□ 0.56
CNOT4O95628 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT4O95628 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.55■□□□□ 0.56
CNOT4O95628 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.55■□□□□ 0.56
CNOT4O95628 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.55■□□□□ 0.56
CNOT4O95628 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.55■□□□□ 0.56
CNOT4O95628 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.55■□□□□ 0.56
CNOT4O95628 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.55■□□□□ 0.56
CNOT4O95628 MFSD11-216ENST00000590393 1141 ntBASIC18.55■□□□□ 0.56
CNOT4O95628 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.55■□□□□ 0.56
CNOT4O95628 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT4O95628 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.55■□□□□ 0.56
CNOT4O95628 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
CNOT4O95628 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT4O95628 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CNOT4O95628 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT4O95628 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT4O95628 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT4O95628 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT4O95628 EP400NL-214ENST00000641289 2402 ntBASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms