Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
SNRNP200O75643 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.15■□□□□ 0.82
SNRNP200O75643 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.15■□□□□ 0.82
SNRNP200O75643 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.15■□□□□ 0.82
SNRNP200O75643 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNRNP200O75643 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNRNP200O75643 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
SNRNP200O75643 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
SNRNP200O75643 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
SNRNP200O75643 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.15■□□□□ 0.82
SNRNP200O75643 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNRNP200O75643 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SNRNP200O75643 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.15■□□□□ 0.82
SNRNP200O75643 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.15■□□□□ 0.82
SNRNP200O75643 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.15■□□□□ 0.82
SNRNP200O75643 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.15■□□□□ 0.82
SNRNP200O75643 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.14■□□□□ 0.82
SNRNP200O75643 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
SNRNP200O75643 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SNRNP200O75643 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.14■□□□□ 0.81
SNRNP200O75643 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNRNP200O75643 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.14■□□□□ 0.81
SNRNP200O75643 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SNRNP200O75643 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.14■□□□□ 0.81
SNRNP200O75643 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.14■□□□□ 0.81
SNRNP200O75643 AC026310.3-201ENST00000625186 2373 ntBASIC20.14■□□□□ 0.81
SNRNP200O75643 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.14■□□□□ 0.81
SNRNP200O75643 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SNRNP200O75643 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.14■□□□□ 0.81
SNRNP200O75643 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.14■□□□□ 0.81
SNRNP200O75643 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNRNP200O75643 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNRNP200O75643 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNRNP200O75643 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.14■□□□□ 0.81
SNRNP200O75643 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.14■□□□□ 0.81
SNRNP200O75643 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.14■□□□□ 0.81
SNRNP200O75643 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
SNRNP200O75643 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNRNP200O75643 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.13■□□□□ 0.81
SNRNP200O75643 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SNRNP200O75643 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNRNP200O75643 AC244015.2-201ENST00000616358 1861 ntBASIC20.13■□□□□ 0.81
SNRNP200O75643 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNRNP200O75643 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNRNP200O75643 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.13■□□□□ 0.81
SNRNP200O75643 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SNRNP200O75643 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
SNRNP200O75643 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SNRNP200O75643 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNRNP200O75643 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.13■□□□□ 0.81
SNRNP200O75643 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNRNP200O75643 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNRNP200O75643 AC068338.2-201ENST00000563278 1430 ntBASIC20.13■□□□□ 0.81
SNRNP200O75643 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.13■□□□□ 0.81
SNRNP200O75643 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.12■□□□□ 0.81
SNRNP200O75643 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SNRNP200O75643 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SNRNP200O75643 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SNRNP200O75643 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SNRNP200O75643 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.12■□□□□ 0.81
SNRNP200O75643 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNRNP200O75643 AC011767.1-201ENST00000617410 1153 ntBASIC20.12■□□□□ 0.81
SNRNP200O75643 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.12■□□□□ 0.81
SNRNP200O75643 AF106564.1-201ENST00000607058 2553 ntBASIC20.12■□□□□ 0.81
SNRNP200O75643 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNRNP200O75643 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNRNP200O75643 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNRNP200O75643 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.12■□□□□ 0.81
SNRNP200O75643 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.12■□□□□ 0.81
SNRNP200O75643 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SNRNP200O75643 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
SNRNP200O75643 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNRNP200O75643 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNRNP200O75643 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.11■□□□□ 0.81
SNRNP200O75643 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SNRNP200O75643 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SNRNP200O75643 CYP2T1P-201ENST00000432607 1285 ntBASIC20.11■□□□□ 0.81
SNRNP200O75643 AC231657.2-201ENST00000624556 255 ntBASIC20.11■□□□□ 0.81
SNRNP200O75643 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SNRNP200O75643 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SNRNP200O75643 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.11■□□□□ 0.81
SNRNP200O75643 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SNRNP200O75643 AF201337.1-201ENST00000520239 748 ntBASIC20.11■□□□□ 0.81
SNRNP200O75643 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SNRNP200O75643 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SNRNP200O75643 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.11■□□□□ 0.81
SNRNP200O75643 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.11■□□□□ 0.81
SNRNP200O75643 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNRNP200O75643 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNRNP200O75643 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.1■□□□□ 0.81
SNRNP200O75643 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNRNP200O75643 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNRNP200O75643 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SNRNP200O75643 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNRNP200O75643 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.1■□□□□ 0.81
SNRNP200O75643 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.1■□□□□ 0.81
SNRNP200O75643 AC007322.4-201ENST00000509611 723 ntBASIC20.1■□□□□ 0.81
SNRNP200O75643 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.1■□□□□ 0.81
SNRNP200O75643 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
SNRNP200O75643 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms