Protein–RNA interactions for Protein: O60479

DLX3, Homeobox protein DLX-3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DLX3O60479 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DLX3O60479 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DLX3O60479 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DLX3O60479 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
DLX3O60479 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DLX3O60479 AC135279.3-201ENST00000610945 1311 ntBASIC20.56■□□□□ 0.88
DLX3O60479 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DLX3O60479 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
DLX3O60479 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.56■□□□□ 0.88
DLX3O60479 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
DLX3O60479 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DLX3O60479 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
DLX3O60479 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
DLX3O60479 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DLX3O60479 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
DLX3O60479 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DLX3O60479 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DLX3O60479 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
DLX3O60479 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
DLX3O60479 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DLX3O60479 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DLX3O60479 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.55■□□□□ 0.88
DLX3O60479 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.55■□□□□ 0.88
DLX3O60479 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.55■□□□□ 0.88
DLX3O60479 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.55■□□□□ 0.88
DLX3O60479 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DLX3O60479 AC008764.7-201ENST00000593779 1081 ntBASIC20.55■□□□□ 0.88
DLX3O60479 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
DLX3O60479 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DLX3O60479 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DLX3O60479 AC073314.1-201ENST00000568729 2216 ntBASIC20.55■□□□□ 0.88
DLX3O60479 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
DLX3O60479 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
DLX3O60479 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.55■□□□□ 0.88
DLX3O60479 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
DLX3O60479 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DLX3O60479 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.54■□□□□ 0.88
DLX3O60479 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DLX3O60479 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DLX3O60479 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
DLX3O60479 AP005212.1-201ENST00000581547 1997 ntBASIC20.54■□□□□ 0.88
DLX3O60479 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DLX3O60479 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
DLX3O60479 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
DLX3O60479 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
DLX3O60479 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DLX3O60479 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DLX3O60479 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.54■□□□□ 0.88
DLX3O60479 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.54■□□□□ 0.88
DLX3O60479 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.54■□□□□ 0.88
DLX3O60479 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.54■□□□□ 0.88
DLX3O60479 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DLX3O60479 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DLX3O60479 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.54■□□□□ 0.88
DLX3O60479 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.54■□□□□ 0.88
DLX3O60479 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
DLX3O60479 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DLX3O60479 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DLX3O60479 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DLX3O60479 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.53■□□□□ 0.88
DLX3O60479 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
DLX3O60479 AC121338.2-201ENST00000622535 1744 ntBASIC20.53■□□□□ 0.88
DLX3O60479 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DLX3O60479 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.53■□□□□ 0.88
DLX3O60479 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.53■□□□□ 0.88
DLX3O60479 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.53■□□□□ 0.88
DLX3O60479 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DLX3O60479 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.53■□□□□ 0.88
DLX3O60479 AC005224.4-201ENST00000583262 1652 ntBASIC20.53■□□□□ 0.88
DLX3O60479 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
DLX3O60479 GABARAPL3-202ENST00000624044 1851 ntBASIC20.53■□□□□ 0.88
DLX3O60479 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
DLX3O60479 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.53■□□□□ 0.88
DLX3O60479 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
DLX3O60479 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DLX3O60479 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DLX3O60479 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DLX3O60479 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
DLX3O60479 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
DLX3O60479 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.53■□□□□ 0.88
DLX3O60479 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.53■□□□□ 0.88
DLX3O60479 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DLX3O60479 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DLX3O60479 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DLX3O60479 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DLX3O60479 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
DLX3O60479 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.52■□□□□ 0.88
DLX3O60479 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DLX3O60479 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DLX3O60479 AC099791.1-201ENST00000416440 715 ntBASIC20.52■□□□□ 0.88
DLX3O60479 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.52■□□□□ 0.88
DLX3O60479 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.52■□□□□ 0.88
DLX3O60479 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
DLX3O60479 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.52■□□□□ 0.88
DLX3O60479 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.52■□□□□ 0.88
DLX3O60479 AC105233.4-201ENST00000642045 216 ntBASIC20.52■□□□□ 0.88
DLX3O60479 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DLX3O60479 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.52■□□□□ 0.88
DLX3O60479 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DLX3O60479 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms