Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGA12O60330 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDHGA12O60330 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDHGA12O60330 AC120498.10-201ENST00000621827 505 ntBASIC20.78■□□□□ 0.92
PCDHGA12O60330 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGA12O60330 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGA12O60330 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PCDHGA12O60330 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PCDHGA12O60330 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGA12O60330 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGA12O60330 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGA12O60330 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.77■□□□□ 0.92
PCDHGA12O60330 PRORSD1P-201ENST00000295112 541 ntBASIC20.77■□□□□ 0.92
PCDHGA12O60330 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
PCDHGA12O60330 AC093787.1-201ENST00000450396 207 ntBASIC20.77■□□□□ 0.92
PCDHGA12O60330 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.77■□□□□ 0.92
PCDHGA12O60330 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.77■□□□□ 0.92
PCDHGA12O60330 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.77■□□□□ 0.92
PCDHGA12O60330 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGA12O60330 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGA12O60330 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
PCDHGA12O60330 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
PCDHGA12O60330 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.77■□□□□ 0.91
PCDHGA12O60330 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA12O60330 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA12O60330 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PCDHGA12O60330 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDHGA12O60330 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA12O60330 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA12O60330 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.76■□□□□ 0.91
PCDHGA12O60330 AC016405.3-201ENST00000607710 860 ntBASIC20.76■□□□□ 0.91
PCDHGA12O60330 AC008175.2-201ENST00000612840 297 ntBASIC20.76■□□□□ 0.91
PCDHGA12O60330 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PCDHGA12O60330 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA12O60330 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA12O60330 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA12O60330 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA12O60330 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHGA12O60330 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA12O60330 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDHGA12O60330 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDHGA12O60330 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA12O60330 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA12O60330 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA12O60330 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA12O60330 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA12O60330 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA12O60330 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PCDHGA12O60330 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PCDHGA12O60330 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA12O60330 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.75■□□□□ 0.91
PCDHGA12O60330 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.75■□□□□ 0.91
PCDHGA12O60330 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA12O60330 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDHGA12O60330 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.75■□□□□ 0.91
PCDHGA12O60330 AL162412.1-201ENST00000567129 965 ntBASIC20.75■□□□□ 0.91
PCDHGA12O60330 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.75■□□□□ 0.91
PCDHGA12O60330 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA12O60330 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA12O60330 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA12O60330 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA12O60330 AC007375.3-201ENST00000600936 2314 ntBASIC20.75■□□□□ 0.91
PCDHGA12O60330 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA12O60330 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA12O60330 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA12O60330 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA12O60330 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PCDHGA12O60330 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA12O60330 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA12O60330 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA12O60330 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA12O60330 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA12O60330 POU5F1P4-201ENST00000413175 1085 ntBASIC20.74■□□□□ 0.91
PCDHGA12O60330 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.74■□□□□ 0.91
PCDHGA12O60330 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.74■□□□□ 0.91
PCDHGA12O60330 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
PCDHGA12O60330 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.74■□□□□ 0.91
PCDHGA12O60330 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHGA12O60330 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.74■□□□□ 0.91
PCDHGA12O60330 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA12O60330 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA12O60330 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PCDHGA12O60330 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHGA12O60330 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA12O60330 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA12O60330 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA12O60330 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
PCDHGA12O60330 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA12O60330 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA12O60330 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA12O60330 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA12O60330 BX276092.2-201ENST00000417668 665 ntBASIC20.73■□□□□ 0.91
PCDHGA12O60330 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.73■□□□□ 0.91
PCDHGA12O60330 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.73■□□□□ 0.91
PCDHGA12O60330 MYC-209ENST00000641252 345 ntBASIC20.73■□□□□ 0.91
PCDHGA12O60330 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.73■□□□□ 0.91
PCDHGA12O60330 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA12O60330 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA12O60330 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA12O60330 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms