Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SLC28A2O43868 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.15■□□□□ 0.82
SLC28A2O43868 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC28A2O43868 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.15■□□□□ 0.82
SLC28A2O43868 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC28A2O43868 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SLC28A2O43868 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
SLC28A2O43868 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SLC28A2O43868 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC28A2O43868 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC28A2O43868 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC28A2O43868 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC28A2O43868 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC28A2O43868 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC28A2O43868 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC28A2O43868 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC28A2O43868 GUSBP6-202ENST00000438529 1198 ntBASIC20.14■□□□□ 0.81
SLC28A2O43868 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.14■□□□□ 0.81
SLC28A2O43868 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.14■□□□□ 0.81
SLC28A2O43868 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.14■□□□□ 0.81
SLC28A2O43868 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.14■□□□□ 0.81
SLC28A2O43868 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.14■□□□□ 0.81
SLC28A2O43868 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC28A2O43868 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.13■□□□□ 0.81
SLC28A2O43868 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC28A2O43868 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC28A2O43868 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SLC28A2O43868 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SLC28A2O43868 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC28A2O43868 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC28A2O43868 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC28A2O43868 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC28A2O43868 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC28A2O43868 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.13■□□□□ 0.81
SLC28A2O43868 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.13■□□□□ 0.81
SLC28A2O43868 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SLC28A2O43868 SLC7A5P2-201ENST00000553010 536 ntBASIC20.13■□□□□ 0.81
SLC28A2O43868 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.13■□□□□ 0.81
SLC28A2O43868 AP006294.2-201ENST00000641667 209 ntBASIC20.13■□□□□ 0.81
SLC28A2O43868 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SLC28A2O43868 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SLC28A2O43868 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.12■□□□□ 0.81
SLC28A2O43868 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SLC28A2O43868 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC28A2O43868 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SLC28A2O43868 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC28A2O43868 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.12■□□□□ 0.81
SLC28A2O43868 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.12■□□□□ 0.81
SLC28A2O43868 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.12■□□□□ 0.81
SLC28A2O43868 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC28A2O43868 AC133041.1-202ENST00000642053 222 ntBASIC20.12■□□□□ 0.81
SLC28A2O43868 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.12■□□□□ 0.81
SLC28A2O43868 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
SLC28A2O43868 AL137060.1-201ENST00000618151 2648 ntBASIC20.12■□□□□ 0.81
SLC28A2O43868 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.12■□□□□ 0.81
SLC28A2O43868 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC28A2O43868 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.12■□□□□ 0.81
SLC28A2O43868 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC28A2O43868 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC28A2O43868 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC28A2O43868 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC28A2O43868 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC28A2O43868 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SLC28A2O43868 OR7E47P-201ENST00000546390 1422 ntBASIC20.11■□□□□ 0.81
SLC28A2O43868 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC28A2O43868 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC28A2O43868 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
SLC28A2O43868 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SLC28A2O43868 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC28A2O43868 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SLC28A2O43868 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC28A2O43868 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
SLC28A2O43868 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.11■□□□□ 0.81
SLC28A2O43868 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.11■□□□□ 0.81
SLC28A2O43868 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.11■□□□□ 0.81
SLC28A2O43868 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.11■□□□□ 0.81
SLC28A2O43868 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
SLC28A2O43868 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.11■□□□□ 0.81
SLC28A2O43868 AC068587.7-201ENST00000641602 218 ntBASIC20.11■□□□□ 0.81
SLC28A2O43868 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.11■□□□□ 0.81
SLC28A2O43868 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SLC28A2O43868 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.11■□□□□ 0.81
SLC28A2O43868 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SLC28A2O43868 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC28A2O43868 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC28A2O43868 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
SLC28A2O43868 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
SLC28A2O43868 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SLC28A2O43868 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC28A2O43868 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
SLC28A2O43868 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.1■□□□□ 0.81
SLC28A2O43868 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC28A2O43868 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.1■□□□□ 0.81
SLC28A2O43868 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SLC28A2O43868 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC28A2O43868 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC28A2O43868 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.1■□□□□ 0.81
SLC28A2O43868 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
SLC28A2O43868 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SLC28A2O43868 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms