Protein–RNA interactions for Protein: O43448

KCNAB3, Voltage-gated potassium channel subunit beta-3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNAB3O43448 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
KCNAB3O43448 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KCNAB3O43448 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KCNAB3O43448 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
KCNAB3O43448 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.69■□□□□ 0.42
KCNAB3O43448 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
KCNAB3O43448 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.69■□□□□ 0.42
KCNAB3O43448 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.69■□□□□ 0.42
KCNAB3O43448 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.69■□□□□ 0.42
KCNAB3O43448 AC099791.2-201ENST00000605725 427 ntBASIC17.69■□□□□ 0.42
KCNAB3O43448 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
KCNAB3O43448 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.69■□□□□ 0.42
KCNAB3O43448 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KCNAB3O43448 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
KCNAB3O43448 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
KCNAB3O43448 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KCNAB3O43448 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KCNAB3O43448 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
KCNAB3O43448 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KCNAB3O43448 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KCNAB3O43448 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KCNAB3O43448 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
KCNAB3O43448 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KCNAB3O43448 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KCNAB3O43448 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KCNAB3O43448 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.68■□□□□ 0.42
KCNAB3O43448 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
KCNAB3O43448 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.68■□□□□ 0.42
KCNAB3O43448 AL138724.1-201ENST00000606771 1088 ntBASIC17.68■□□□□ 0.42
KCNAB3O43448 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KCNAB3O43448 LINC01529-204ENST00000636474 1715 ntBASIC17.68■□□□□ 0.42
KCNAB3O43448 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
KCNAB3O43448 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KCNAB3O43448 AFG3L1P-217ENST00000557444 2447 ntBASIC17.68■□□□□ 0.42
KCNAB3O43448 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
KCNAB3O43448 FEM1AP1-201ENST00000431297 1995 ntBASIC17.68■□□□□ 0.42
KCNAB3O43448 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KCNAB3O43448 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNAB3O43448 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.67■□□□□ 0.42
KCNAB3O43448 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.67■□□□□ 0.42
KCNAB3O43448 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNAB3O43448 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KCNAB3O43448 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KCNAB3O43448 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNAB3O43448 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.67■□□□□ 0.42
KCNAB3O43448 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNAB3O43448 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KCNAB3O43448 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.67■□□□□ 0.42
KCNAB3O43448 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.67■□□□□ 0.42
KCNAB3O43448 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.67■□□□□ 0.42
KCNAB3O43448 AL031602.1-201ENST00000633169 911 ntBASIC17.67■□□□□ 0.42
KCNAB3O43448 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
KCNAB3O43448 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNAB3O43448 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
KCNAB3O43448 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNAB3O43448 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNAB3O43448 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
KCNAB3O43448 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
KCNAB3O43448 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.67■□□□□ 0.42
KCNAB3O43448 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNAB3O43448 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KCNAB3O43448 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KCNAB3O43448 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNAB3O43448 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNAB3O43448 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNAB3O43448 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
KCNAB3O43448 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KCNAB3O43448 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNAB3O43448 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.66■□□□□ 0.42
KCNAB3O43448 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KCNAB3O43448 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
KCNAB3O43448 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNAB3O43448 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KCNAB3O43448 DUX4L4-201ENST00000566884 1269 ntBASIC17.66■□□□□ 0.42
KCNAB3O43448 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNAB3O43448 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNAB3O43448 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KCNAB3O43448 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KCNAB3O43448 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNAB3O43448 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNAB3O43448 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNAB3O43448 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KCNAB3O43448 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNAB3O43448 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.66■□□□□ 0.42
KCNAB3O43448 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KCNAB3O43448 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
KCNAB3O43448 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNAB3O43448 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNAB3O43448 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.65■□□□□ 0.42
KCNAB3O43448 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNAB3O43448 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNAB3O43448 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KCNAB3O43448 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNAB3O43448 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.65■□□□□ 0.42
KCNAB3O43448 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.65■□□□□ 0.42
KCNAB3O43448 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.65■□□□□ 0.42
KCNAB3O43448 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNAB3O43448 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KCNAB3O43448 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNAB3O43448 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 826 ms