Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.04■□□□□ 0.96
TRIM38O00635 DUX4L16-201ENST00000555130 1264 ntBASIC21.04■□□□□ 0.96
TRIM38O00635 UBE2DNL-204ENST00000602536 740 ntBASIC21.04■□□□□ 0.96
TRIM38O00635 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.04■□□□□ 0.96
TRIM38O00635 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM38O00635 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM38O00635 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
TRIM38O00635 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM38O00635 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM38O00635 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM38O00635 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM38O00635 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
TRIM38O00635 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.03■□□□□ 0.96
TRIM38O00635 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.03■□□□□ 0.96
TRIM38O00635 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM38O00635 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.03■□□□□ 0.96
TRIM38O00635 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM38O00635 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.03■□□□□ 0.96
TRIM38O00635 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM38O00635 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
TRIM38O00635 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.03■□□□□ 0.96
TRIM38O00635 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM38O00635 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
TRIM38O00635 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM38O00635 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM38O00635 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM38O00635 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
TRIM38O00635 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM38O00635 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM38O00635 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TRIM38O00635 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
TRIM38O00635 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.02■□□□□ 0.96
TRIM38O00635 AP001160.3-201ENST00000601484 763 ntBASIC21.02■□□□□ 0.96
TRIM38O00635 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.01■□□□□ 0.95
TRIM38O00635 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.01■□□□□ 0.95
TRIM38O00635 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM38O00635 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.01■□□□□ 0.95
TRIM38O00635 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.01■□□□□ 0.95
TRIM38O00635 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM38O00635 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM38O00635 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM38O00635 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.01■□□□□ 0.95
TRIM38O00635 AC083906.2-201ENST00000511578 360 ntBASIC21.01■□□□□ 0.95
TRIM38O00635 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM38O00635 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM38O00635 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM38O00635 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM38O00635 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.01■□□□□ 0.95
TRIM38O00635 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM38O00635 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM38O00635 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
TRIM38O00635 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TRIM38O00635 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRIM38O00635 AC055733.4-201ENST00000638462 1354 ntBASIC21■□□□□ 0.95
TRIM38O00635 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM38O00635 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM38O00635 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21■□□□□ 0.95
TRIM38O00635 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
TRIM38O00635 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TRIM38O00635 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TRIM38O00635 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21■□□□□ 0.95
TRIM38O00635 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRIM38O00635 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21■□□□□ 0.95
TRIM38O00635 AC142086.2-201ENST00000569753 217 ntBASIC21■□□□□ 0.95
TRIM38O00635 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21■□□□□ 0.95
TRIM38O00635 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TRIM38O00635 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21■□□□□ 0.95
TRIM38O00635 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21■□□□□ 0.95
TRIM38O00635 AL121832.2-201ENST00000610979 668 ntBASIC21■□□□□ 0.95
TRIM38O00635 AC231657.2-201ENST00000624556 255 ntBASIC21■□□□□ 0.95
TRIM38O00635 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM38O00635 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM38O00635 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM38O00635 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM38O00635 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM38O00635 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM38O00635 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21■□□□□ 0.95
TRIM38O00635 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21■□□□□ 0.95
TRIM38O00635 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM38O00635 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21■□□□□ 0.95
TRIM38O00635 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM38O00635 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
TRIM38O00635 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TRIM38O00635 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TRIM38O00635 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM38O00635 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM38O00635 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM38O00635 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM38O00635 AC007322.1-201ENST00000426983 750 ntBASIC20.99■□□□□ 0.95
TRIM38O00635 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM38O00635 TSPY6P-201ENST00000448518 926 ntBASIC20.99■□□□□ 0.95
TRIM38O00635 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TRIM38O00635 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.99■□□□□ 0.95
TRIM38O00635 AC005181.1-201ENST00000604782 1256 ntBASIC20.99■□□□□ 0.95
TRIM38O00635 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM38O00635 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM38O00635 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM38O00635 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM38O00635 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.98■□□□□ 0.95
TRIM38O00635 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms