Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
NDUFA4O00483 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
NDUFA4O00483 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.09■□□□□ 0.17
NDUFA4O00483 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
NDUFA4O00483 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
NDUFA4O00483 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NDUFA4O00483 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
NDUFA4O00483 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.09■□□□□ 0.17
NDUFA4O00483 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.09■□□□□ 0.17
NDUFA4O00483 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NDUFA4O00483 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NDUFA4O00483 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.09■□□□□ 0.17
NDUFA4O00483 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NDUFA4O00483 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.09■□□□□ 0.17
NDUFA4O00483 DUX4L2-201ENST00000561772 1275 ntBASIC16.09■□□□□ 0.17
NDUFA4O00483 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.09■□□□□ 0.17
NDUFA4O00483 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.09■□□□□ 0.17
NDUFA4O00483 DUX4L6-201ENST00000626483 1275 ntBASIC16.09■□□□□ 0.17
NDUFA4O00483 DUX4L1-201ENST00000627662 1275 ntBASIC16.09■□□□□ 0.17
NDUFA4O00483 DUX4L8-201ENST00000629013 1275 ntBASIC16.09■□□□□ 0.17
NDUFA4O00483 DUX4L3-201ENST00000630187 1275 ntBASIC16.09■□□□□ 0.17
NDUFA4O00483 DUX4L7-201ENST00000630678 1275 ntBASIC16.09■□□□□ 0.17
NDUFA4O00483 DUX4L5-201ENST00000630834 1275 ntBASIC16.09■□□□□ 0.17
NDUFA4O00483 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NDUFA4O00483 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NDUFA4O00483 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NDUFA4O00483 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NDUFA4O00483 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NDUFA4O00483 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NDUFA4O00483 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
NDUFA4O00483 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.08■□□□□ 0.17
NDUFA4O00483 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
NDUFA4O00483 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
NDUFA4O00483 AL049796.1-201ENST00000565336 1766 ntBASIC16.08■□□□□ 0.17
NDUFA4O00483 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.08■□□□□ 0.17
NDUFA4O00483 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NDUFA4O00483 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC16.08■□□□□ 0.16
NDUFA4O00483 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.08■□□□□ 0.16
NDUFA4O00483 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
NDUFA4O00483 AC010141.2-201ENST00000452426 721 ntBASIC16.08■□□□□ 0.16
NDUFA4O00483 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.08■□□□□ 0.16
NDUFA4O00483 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
NDUFA4O00483 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NDUFA4O00483 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NDUFA4O00483 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NDUFA4O00483 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
NDUFA4O00483 AC019069.1-201ENST00000610008 1333 ntBASIC16.08■□□□□ 0.16
NDUFA4O00483 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.08■□□□□ 0.16
NDUFA4O00483 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NDUFA4O00483 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
NDUFA4O00483 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDUFA4O00483 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDUFA4O00483 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
NDUFA4O00483 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDUFA4O00483 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
NDUFA4O00483 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDUFA4O00483 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDUFA4O00483 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.07■□□□□ 0.16
NDUFA4O00483 AC097381.1-201ENST00000429019 1296 ntBASIC16.07■□□□□ 0.16
NDUFA4O00483 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.07■□□□□ 0.16
NDUFA4O00483 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.07■□□□□ 0.16
NDUFA4O00483 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.07■□□□□ 0.16
NDUFA4O00483 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.07■□□□□ 0.16
NDUFA4O00483 AC104187.1-201ENST00000607510 612 ntBASIC16.07■□□□□ 0.16
NDUFA4O00483 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
NDUFA4O00483 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDUFA4O00483 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.07■□□□□ 0.16
NDUFA4O00483 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
NDUFA4O00483 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDUFA4O00483 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
NDUFA4O00483 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NDUFA4O00483 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
NDUFA4O00483 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDUFA4O00483 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDUFA4O00483 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
NDUFA4O00483 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.06■□□□□ 0.16
NDUFA4O00483 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.06■□□□□ 0.16
NDUFA4O00483 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDUFA4O00483 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDUFA4O00483 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDUFA4O00483 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
NDUFA4O00483 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.06■□□□□ 0.16
NDUFA4O00483 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.06■□□□□ 0.16
NDUFA4O00483 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NDUFA4O00483 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDUFA4O00483 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.06■□□□□ 0.16
NDUFA4O00483 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.06■□□□□ 0.16
NDUFA4O00483 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.06■□□□□ 0.16
NDUFA4O00483 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDUFA4O00483 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.05■□□□□ 0.16
NDUFA4O00483 AC061975.6-201ENST00000579045 1553 ntBASIC16.05■□□□□ 0.16
NDUFA4O00483 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFA4O00483 KRT16P2-201ENST00000414673 1423 ntBASIC16.05■□□□□ 0.16
NDUFA4O00483 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFA4O00483 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFA4O00483 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFA4O00483 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.05■□□□□ 0.16
NDUFA4O00483 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFA4O00483 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFA4O00483 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms