Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CDC7O00311 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CDC7O00311 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.56■□□□□ 0.88
CDC7O00311 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDC7O00311 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CDC7O00311 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.56■□□□□ 0.88
CDC7O00311 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.56■□□□□ 0.88
CDC7O00311 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.56■□□□□ 0.88
CDC7O00311 AC053503.5-201ENST00000601508 636 ntBASIC20.56■□□□□ 0.88
CDC7O00311 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDC7O00311 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDC7O00311 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.56■□□□□ 0.88
CDC7O00311 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDC7O00311 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDC7O00311 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.56■□□□□ 0.88
CDC7O00311 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDC7O00311 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.56■□□□□ 0.88
CDC7O00311 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDC7O00311 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDC7O00311 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDC7O00311 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDC7O00311 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDC7O00311 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDC7O00311 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CDC7O00311 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDC7O00311 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CDC7O00311 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDC7O00311 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDC7O00311 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.55■□□□□ 0.88
CDC7O00311 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.55■□□□□ 0.88
CDC7O00311 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDC7O00311 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CDC7O00311 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDC7O00311 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDC7O00311 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CDC7O00311 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CDC7O00311 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.54■□□□□ 0.88
CDC7O00311 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDC7O00311 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.54■□□□□ 0.88
CDC7O00311 AC027612.3-201ENST00000413684 1047 ntBASIC20.54■□□□□ 0.88
CDC7O00311 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.54■□□□□ 0.88
CDC7O00311 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDC7O00311 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDC7O00311 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDC7O00311 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDC7O00311 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.54■□□□□ 0.88
CDC7O00311 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDC7O00311 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDC7O00311 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.54■□□□□ 0.88
CDC7O00311 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDC7O00311 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDC7O00311 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDC7O00311 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CDC7O00311 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.53■□□□□ 0.88
CDC7O00311 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDC7O00311 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDC7O00311 AC079140.4-201ENST00000507448 529 ntBASIC20.53■□□□□ 0.88
CDC7O00311 AC061975.6-201ENST00000579045 1553 ntBASIC20.53■□□□□ 0.88
CDC7O00311 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.53■□□□□ 0.88
CDC7O00311 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.53■□□□□ 0.88
CDC7O00311 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDC7O00311 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDC7O00311 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDC7O00311 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDC7O00311 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDC7O00311 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDC7O00311 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDC7O00311 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDC7O00311 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDC7O00311 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDC7O00311 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CDC7O00311 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDC7O00311 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CDC7O00311 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
CDC7O00311 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
CDC7O00311 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDC7O00311 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CDC7O00311 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.52■□□□□ 0.88
CDC7O00311 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDC7O00311 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.52■□□□□ 0.88
CDC7O00311 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDC7O00311 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CDC7O00311 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CDC7O00311 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.52■□□□□ 0.87
CDC7O00311 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
CDC7O00311 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDC7O00311 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDC7O00311 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDC7O00311 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.51■□□□□ 0.87
CDC7O00311 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDC7O00311 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.51■□□□□ 0.87
CDC7O00311 AL157384.1-201ENST00000445995 2473 ntBASIC20.51■□□□□ 0.87
CDC7O00311 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
CDC7O00311 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDC7O00311 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDC7O00311 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CDC7O00311 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CDC7O00311 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDC7O00311 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDC7O00311 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms