Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMX2-CTNND1H3BSU7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
TMX2-CTNND1H3BSU7 AF201337.1-201ENST00000520239 748 ntBASIC20.54■□□□□ 0.88
TMX2-CTNND1H3BSU7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.54■□□□□ 0.88
TMX2-CTNND1H3BSU7 AC133552.2-202ENST00000575694 574 ntBASIC20.54■□□□□ 0.88
TMX2-CTNND1H3BSU7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMX2-CTNND1H3BSU7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.54■□□□□ 0.88
TMX2-CTNND1H3BSU7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.54■□□□□ 0.88
TMX2-CTNND1H3BSU7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.54■□□□□ 0.88
TMX2-CTNND1H3BSU7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMX2-CTNND1H3BSU7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.54■□□□□ 0.88
TMX2-CTNND1H3BSU7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMX2-CTNND1H3BSU7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TMX2-CTNND1H3BSU7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMX2-CTNND1H3BSU7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMX2-CTNND1H3BSU7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
TMX2-CTNND1H3BSU7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMX2-CTNND1H3BSU7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TMX2-CTNND1H3BSU7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TMX2-CTNND1H3BSU7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TMX2-CTNND1H3BSU7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TMX2-CTNND1H3BSU7 KRT18P6-201ENST00000555540 1265 ntBASIC20.53■□□□□ 0.88
TMX2-CTNND1H3BSU7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.53■□□□□ 0.88
TMX2-CTNND1H3BSU7 AC010536.3-201ENST00000620306 533 ntBASIC20.53■□□□□ 0.88
TMX2-CTNND1H3BSU7 AC133041.1-202ENST00000642053 222 ntBASIC20.53■□□□□ 0.88
TMX2-CTNND1H3BSU7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.53■□□□□ 0.88
TMX2-CTNND1H3BSU7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
TMX2-CTNND1H3BSU7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMX2-CTNND1H3BSU7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TMX2-CTNND1H3BSU7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMX2-CTNND1H3BSU7 OR7E47P-201ENST00000546390 1422 ntBASIC20.53■□□□□ 0.88
TMX2-CTNND1H3BSU7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.53■□□□□ 0.88
TMX2-CTNND1H3BSU7 LINC01960-201ENST00000563759 1884 ntBASIC20.52■□□□□ 0.88
TMX2-CTNND1H3BSU7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.52■□□□□ 0.88
TMX2-CTNND1H3BSU7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TMX2-CTNND1H3BSU7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.52■□□□□ 0.88
TMX2-CTNND1H3BSU7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.52■□□□□ 0.88
TMX2-CTNND1H3BSU7 AC073210.2-201ENST00000430369 194 ntBASIC20.52■□□□□ 0.88
TMX2-CTNND1H3BSU7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.52■□□□□ 0.88
TMX2-CTNND1H3BSU7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TMX2-CTNND1H3BSU7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.52■□□□□ 0.88
TMX2-CTNND1H3BSU7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.52■□□□□ 0.88
TMX2-CTNND1H3BSU7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
TMX2-CTNND1H3BSU7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.52■□□□□ 0.88
TMX2-CTNND1H3BSU7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TMX2-CTNND1H3BSU7 FBXW4P1-201ENST00000426721 2239 ntBASIC20.51■□□□□ 0.87
TMX2-CTNND1H3BSU7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.51■□□□□ 0.87
TMX2-CTNND1H3BSU7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMX2-CTNND1H3BSU7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TMX2-CTNND1H3BSU7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TMX2-CTNND1H3BSU7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
TMX2-CTNND1H3BSU7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMX2-CTNND1H3BSU7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMX2-CTNND1H3BSU7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TMX2-CTNND1H3BSU7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMX2-CTNND1H3BSU7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMX2-CTNND1H3BSU7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMX2-CTNND1H3BSU7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TMX2-CTNND1H3BSU7 AC242852.2-201ENST00000615738 1807 ntBASIC20.5■□□□□ 0.87
TMX2-CTNND1H3BSU7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.5■□□□□ 0.87
TMX2-CTNND1H3BSU7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.5■□□□□ 0.87
TMX2-CTNND1H3BSU7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.5■□□□□ 0.87
TMX2-CTNND1H3BSU7 GUSBP6-202ENST00000438529 1198 ntBASIC20.5■□□□□ 0.87
TMX2-CTNND1H3BSU7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
TMX2-CTNND1H3BSU7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TMX2-CTNND1H3BSU7 AC013268.1-206ENST00000638368 961 ntBASIC20.5■□□□□ 0.87
TMX2-CTNND1H3BSU7 AC112229.1-201ENST00000639295 961 ntBASIC20.5■□□□□ 0.87
TMX2-CTNND1H3BSU7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TMX2-CTNND1H3BSU7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TMX2-CTNND1H3BSU7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.5■□□□□ 0.87
TMX2-CTNND1H3BSU7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TMX2-CTNND1H3BSU7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.49■□□□□ 0.87
TMX2-CTNND1H3BSU7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
TMX2-CTNND1H3BSU7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMX2-CTNND1H3BSU7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TMX2-CTNND1H3BSU7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMX2-CTNND1H3BSU7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMX2-CTNND1H3BSU7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMX2-CTNND1H3BSU7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TMX2-CTNND1H3BSU7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.49■□□□□ 0.87
TMX2-CTNND1H3BSU7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.49■□□□□ 0.87
TMX2-CTNND1H3BSU7 AC105036.2-201ENST00000569468 176 ntBASIC20.49■□□□□ 0.87
TMX2-CTNND1H3BSU7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMX2-CTNND1H3BSU7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMX2-CTNND1H3BSU7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMX2-CTNND1H3BSU7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.49■□□□□ 0.87
TMX2-CTNND1H3BSU7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TMX2-CTNND1H3BSU7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TMX2-CTNND1H3BSU7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TMX2-CTNND1H3BSU7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TMX2-CTNND1H3BSU7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMX2-CTNND1H3BSU7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TMX2-CTNND1H3BSU7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMX2-CTNND1H3BSU7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
TMX2-CTNND1H3BSU7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMX2-CTNND1H3BSU7 AC069152.1-201ENST00000438030 544 ntBASIC20.48■□□□□ 0.87
TMX2-CTNND1H3BSU7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TMX2-CTNND1H3BSU7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TMX2-CTNND1H3BSU7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.48■□□□□ 0.87
TMX2-CTNND1H3BSU7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms