Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.87■□□□□ 0.93
H3BM21 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.87■□□□□ 0.93
H3BM21 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
H3BM21 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
H3BM21 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
H3BM21 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.87■□□□□ 0.93
H3BM21 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
H3BM21 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
H3BM21 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
H3BM21 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
H3BM21 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
H3BM21 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
H3BM21 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
H3BM21 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
H3BM21 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.86■□□□□ 0.93
H3BM21 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
H3BM21 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
H3BM21 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.86■□□□□ 0.93
H3BM21 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
H3BM21 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.86■□□□□ 0.93
H3BM21 AC142086.2-201ENST00000569753 217 ntBASIC20.86■□□□□ 0.93
H3BM21 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.86■□□□□ 0.93
H3BM21 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.86■□□□□ 0.93
H3BM21 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
H3BM21 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
H3BM21 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
H3BM21 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.86■□□□□ 0.93
H3BM21 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
H3BM21 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
H3BM21 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.85■□□□□ 0.93
H3BM21 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
H3BM21 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
H3BM21 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.85■□□□□ 0.93
H3BM21 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
H3BM21 AC003102.1-202ENST00000563394 1796 ntBASIC20.85■□□□□ 0.93
H3BM21 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
H3BM21 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
H3BM21 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
H3BM21 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.85■□□□□ 0.93
H3BM21 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.85■□□□□ 0.93
H3BM21 CNN2P6-201ENST00000439038 900 ntBASIC20.85■□□□□ 0.93
H3BM21 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
H3BM21 AF201337.1-201ENST00000520239 748 ntBASIC20.85■□□□□ 0.93
H3BM21 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.85■□□□□ 0.93
H3BM21 SLC7A5P2-201ENST00000553010 536 ntBASIC20.85■□□□□ 0.93
H3BM21 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.85■□□□□ 0.93
H3BM21 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.85■□□□□ 0.93
H3BM21 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.85■□□□□ 0.93
H3BM21 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.85■□□□□ 0.93
H3BM21 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.85■□□□□ 0.93
H3BM21 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.85■□□□□ 0.93
H3BM21 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.85■□□□□ 0.93
H3BM21 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
H3BM21 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
H3BM21 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.85■□□□□ 0.93
H3BM21 AC010542.4-201ENST00000563151 1910 ntBASIC20.84■□□□□ 0.93
H3BM21 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
H3BM21 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.84■□□□□ 0.93
H3BM21 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
H3BM21 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
H3BM21 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.84■□□□□ 0.93
H3BM21 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.84■□□□□ 0.93
H3BM21 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.84■□□□□ 0.93
H3BM21 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.84■□□□□ 0.93
H3BM21 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.84■□□□□ 0.93
H3BM21 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.84■□□□□ 0.93
H3BM21 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
H3BM21 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
H3BM21 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
H3BM21 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
H3BM21 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
H3BM21 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
H3BM21 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
H3BM21 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
H3BM21 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
H3BM21 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
H3BM21 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.83■□□□□ 0.93
H3BM21 TERF1P5-201ENST00000477545 1207 ntBASIC20.83■□□□□ 0.93
H3BM21 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
H3BM21 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.83■□□□□ 0.93
H3BM21 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
H3BM21 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
H3BM21 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.83■□□□□ 0.92
H3BM21 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
H3BM21 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
H3BM21 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
H3BM21 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
H3BM21 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
H3BM21 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
H3BM21 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
H3BM21 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.82■□□□□ 0.92
H3BM21 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
H3BM21 POU5F1P4-201ENST00000413175 1085 ntBASIC20.82■□□□□ 0.92
H3BM21 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.82■□□□□ 0.92
H3BM21 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
H3BM21 AC105036.2-201ENST00000569468 176 ntBASIC20.82■□□□□ 0.92
H3BM21 AC133552.2-202ENST00000575694 574 ntBASIC20.82■□□□□ 0.92
H3BM21 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
H3BM21 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.82■□□□□ 0.92
H3BM21 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms