Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPIPA2E9PIF3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.1■□□□□ 0.65
NPIPA2E9PIF3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
NPIPA2E9PIF3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.1■□□□□ 0.65
NPIPA2E9PIF3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPIPA2E9PIF3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.1■□□□□ 0.65
NPIPA2E9PIF3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.1■□□□□ 0.65
NPIPA2E9PIF3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.1■□□□□ 0.65
NPIPA2E9PIF3 AC010536.3-201ENST00000620306 533 ntBASIC19.1■□□□□ 0.65
NPIPA2E9PIF3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.1■□□□□ 0.65
NPIPA2E9PIF3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.1■□□□□ 0.65
NPIPA2E9PIF3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
NPIPA2E9PIF3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPIPA2E9PIF3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPIPA2E9PIF3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPIPA2E9PIF3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NPIPA2E9PIF3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPIPA2E9PIF3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPIPA2E9PIF3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPIPA2E9PIF3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.1■□□□□ 0.65
NPIPA2E9PIF3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.09■□□□□ 0.65
NPIPA2E9PIF3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.09■□□□□ 0.65
NPIPA2E9PIF3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPIPA2E9PIF3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NPIPA2E9PIF3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.09■□□□□ 0.65
NPIPA2E9PIF3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPIPA2E9PIF3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.09■□□□□ 0.65
NPIPA2E9PIF3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPIPA2E9PIF3 SLC7A5P2-201ENST00000553010 536 ntBASIC19.09■□□□□ 0.65
NPIPA2E9PIF3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPIPA2E9PIF3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
NPIPA2E9PIF3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPIPA2E9PIF3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPIPA2E9PIF3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
NPIPA2E9PIF3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NPIPA2E9PIF3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NPIPA2E9PIF3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
NPIPA2E9PIF3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPIPA2E9PIF3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
NPIPA2E9PIF3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NPIPA2E9PIF3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
NPIPA2E9PIF3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NPIPA2E9PIF3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.08■□□□□ 0.65
NPIPA2E9PIF3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
NPIPA2E9PIF3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.08■□□□□ 0.64
NPIPA2E9PIF3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.08■□□□□ 0.64
NPIPA2E9PIF3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.08■□□□□ 0.64
NPIPA2E9PIF3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NPIPA2E9PIF3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.08■□□□□ 0.64
NPIPA2E9PIF3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NPIPA2E9PIF3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NPIPA2E9PIF3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NPIPA2E9PIF3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NPIPA2E9PIF3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NPIPA2E9PIF3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
NPIPA2E9PIF3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NPIPA2E9PIF3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPIPA2E9PIF3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPIPA2E9PIF3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPIPA2E9PIF3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPIPA2E9PIF3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPIPA2E9PIF3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
NPIPA2E9PIF3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
NPIPA2E9PIF3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
NPIPA2E9PIF3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.07■□□□□ 0.64
NPIPA2E9PIF3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPIPA2E9PIF3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.07■□□□□ 0.64
NPIPA2E9PIF3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.07■□□□□ 0.64
NPIPA2E9PIF3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPIPA2E9PIF3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPIPA2E9PIF3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NPIPA2E9PIF3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NPIPA2E9PIF3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPIPA2E9PIF3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPIPA2E9PIF3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
NPIPA2E9PIF3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
NPIPA2E9PIF3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPIPA2E9PIF3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NPIPA2E9PIF3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NPIPA2E9PIF3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
NPIPA2E9PIF3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPIPA2E9PIF3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NPIPA2E9PIF3 CNN2P6-201ENST00000439038 900 ntBASIC19.06■□□□□ 0.64
NPIPA2E9PIF3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.06■□□□□ 0.64
NPIPA2E9PIF3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.06■□□□□ 0.64
NPIPA2E9PIF3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.06■□□□□ 0.64
NPIPA2E9PIF3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
NPIPA2E9PIF3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NPIPA2E9PIF3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NPIPA2E9PIF3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NPIPA2E9PIF3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPA2E9PIF3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
NPIPA2E9PIF3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPA2E9PIF3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPA2E9PIF3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPA2E9PIF3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.05■□□□□ 0.64
NPIPA2E9PIF3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
NPIPA2E9PIF3 TSPY6P-201ENST00000448518 926 ntBASIC19.05■□□□□ 0.64
NPIPA2E9PIF3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPA2E9PIF3 AC008175.2-201ENST00000612840 297 ntBASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms