Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL6A6A6NMZ7 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.09■□□□□ 0.65
COL6A6A6NMZ7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
COL6A6A6NMZ7 AC092368.3-202ENST00000574180 1591 ntBASIC19.09■□□□□ 0.65
COL6A6A6NMZ7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
COL6A6A6NMZ7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.09■□□□□ 0.65
COL6A6A6NMZ7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL6A6A6NMZ7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.09■□□□□ 0.65
COL6A6A6NMZ7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
COL6A6A6NMZ7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.09■□□□□ 0.65
COL6A6A6NMZ7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL6A6A6NMZ7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL6A6A6NMZ7 AP006587.3-201ENST00000525742 1516 ntBASIC19.08■□□□□ 0.65
COL6A6A6NMZ7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL6A6A6NMZ7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.08■□□□□ 0.65
COL6A6A6NMZ7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
COL6A6A6NMZ7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
COL6A6A6NMZ7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL6A6A6NMZ7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
COL6A6A6NMZ7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.08■□□□□ 0.64
COL6A6A6NMZ7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.08■□□□□ 0.64
COL6A6A6NMZ7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.08■□□□□ 0.64
COL6A6A6NMZ7 AC124016.1-201ENST00000609552 612 ntBASIC19.08■□□□□ 0.64
COL6A6A6NMZ7 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
COL6A6A6NMZ7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
COL6A6A6NMZ7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL6A6A6NMZ7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL6A6A6NMZ7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.07■□□□□ 0.64
COL6A6A6NMZ7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL6A6A6NMZ7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL6A6A6NMZ7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.07■□□□□ 0.64
COL6A6A6NMZ7 RARRES2P10-201ENST00000564312 460 ntBASIC19.07■□□□□ 0.64
COL6A6A6NMZ7 AL590326.2-201ENST00000625139 305 ntBASIC19.07■□□□□ 0.64
COL6A6A6NMZ7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL6A6A6NMZ7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL6A6A6NMZ7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL6A6A6NMZ7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.07■□□□□ 0.64
COL6A6A6NMZ7 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.07■□□□□ 0.64
COL6A6A6NMZ7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
COL6A6A6NMZ7 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL6A6A6NMZ7 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.07■□□□□ 0.64
COL6A6A6NMZ7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
COL6A6A6NMZ7 PRKY-204ENST00000533551 1019 ntBASIC19.07■□□□□ 0.64
COL6A6A6NMZ7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
COL6A6A6NMZ7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.07■□□□□ 0.64
COL6A6A6NMZ7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.07■□□□□ 0.64
COL6A6A6NMZ7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.07■□□□□ 0.64
COL6A6A6NMZ7 AL589743.5-201ENST00000616611 1050 ntBASIC19.07■□□□□ 0.64
COL6A6A6NMZ7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.07■□□□□ 0.64
COL6A6A6NMZ7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL6A6A6NMZ7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL6A6A6NMZ7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL6A6A6NMZ7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL6A6A6NMZ7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL6A6A6NMZ7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.06■□□□□ 0.64
COL6A6A6NMZ7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL6A6A6NMZ7 AC239809.2-201ENST00000415381 517 ntBASIC19.06■□□□□ 0.64
COL6A6A6NMZ7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL6A6A6NMZ7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
COL6A6A6NMZ7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.06■□□□□ 0.64
COL6A6A6NMZ7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL6A6A6NMZ7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
COL6A6A6NMZ7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.05■□□□□ 0.64
COL6A6A6NMZ7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.05■□□□□ 0.64
COL6A6A6NMZ7 OR7E47P-201ENST00000546390 1422 ntBASIC19.05■□□□□ 0.64
COL6A6A6NMZ7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
COL6A6A6NMZ7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.05■□□□□ 0.64
COL6A6A6NMZ7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL6A6A6NMZ7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.05■□□□□ 0.64
COL6A6A6NMZ7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.05■□□□□ 0.64
COL6A6A6NMZ7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL6A6A6NMZ7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.05■□□□□ 0.64
COL6A6A6NMZ7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL6A6A6NMZ7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL6A6A6NMZ7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.05■□□□□ 0.64
COL6A6A6NMZ7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.05■□□□□ 0.64
COL6A6A6NMZ7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.05■□□□□ 0.64
COL6A6A6NMZ7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL6A6A6NMZ7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL6A6A6NMZ7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.05■□□□□ 0.64
COL6A6A6NMZ7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL6A6A6NMZ7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.05■□□□□ 0.64
COL6A6A6NMZ7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL6A6A6NMZ7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL6A6A6NMZ7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
COL6A6A6NMZ7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL6A6A6NMZ7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.04■□□□□ 0.64
COL6A6A6NMZ7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL6A6A6NMZ7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.04■□□□□ 0.64
COL6A6A6NMZ7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL6A6A6NMZ7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.04■□□□□ 0.64
COL6A6A6NMZ7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.04■□□□□ 0.64
COL6A6A6NMZ7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.04■□□□□ 0.64
COL6A6A6NMZ7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.04■□□□□ 0.64
COL6A6A6NMZ7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
COL6A6A6NMZ7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL6A6A6NMZ7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL6A6A6NMZ7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
COL6A6A6NMZ7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.04■□□□□ 0.64
COL6A6A6NMZ7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms