Protein–RNA interactions for Protein: A0A0J9YWB2

TRBV7-9, T-cell receptor beta variable 7-9 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-9A0A0J9YWB2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC15.61■□□□□ 0.09
TRBV7-9A0A0J9YWB2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV7-9A0A0J9YWB2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV7-9A0A0J9YWB2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV7-9A0A0J9YWB2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV7-9A0A0J9YWB2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV7-9A0A0J9YWB2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRBV7-9A0A0J9YWB2 FXN-202ENST00000396364 980 ntTSL 5 BASIC15.61■□□□□ 0.09
TRBV7-9A0A0J9YWB2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC15.61■□□□□ 0.09
TRBV7-9A0A0J9YWB2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV7-9A0A0J9YWB2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC15.61■□□□□ 0.09
TRBV7-9A0A0J9YWB2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV7-9A0A0J9YWB2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV7-9A0A0J9YWB2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV7-9A0A0J9YWB2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC15.61■□□□□ 0.09
TRBV7-9A0A0J9YWB2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC15.61■□□□□ 0.09
TRBV7-9A0A0J9YWB2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV7-9A0A0J9YWB2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV7-9A0A0J9YWB2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC15.61■□□□□ 0.09
TRBV7-9A0A0J9YWB2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV7-9A0A0J9YWB2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC15.6■□□□□ 0.09
TRBV7-9A0A0J9YWB2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV7-9A0A0J9YWB2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV7-9A0A0J9YWB2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV7-9A0A0J9YWB2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TRBV7-9A0A0J9YWB2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV7-9A0A0J9YWB2 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV7-9A0A0J9YWB2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC15.6■□□□□ 0.09
TRBV7-9A0A0J9YWB2 MPST-208ENST00000628507 698 ntTSL 5 BASIC15.6■□□□□ 0.09
TRBV7-9A0A0J9YWB2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV7-9A0A0J9YWB2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV7-9A0A0J9YWB2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC15.6■□□□□ 0.09
TRBV7-9A0A0J9YWB2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TRBV7-9A0A0J9YWB2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV7-9A0A0J9YWB2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV7-9A0A0J9YWB2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV7-9A0A0J9YWB2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRBV7-9A0A0J9YWB2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV7-9A0A0J9YWB2 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV7-9A0A0J9YWB2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV7-9A0A0J9YWB2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV7-9A0A0J9YWB2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV7-9A0A0J9YWB2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TRBV7-9A0A0J9YWB2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV7-9A0A0J9YWB2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV7-9A0A0J9YWB2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC15.59■□□□□ 0.09
TRBV7-9A0A0J9YWB2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV7-9A0A0J9YWB2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV7-9A0A0J9YWB2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC15.59■□□□□ 0.09
TRBV7-9A0A0J9YWB2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV7-9A0A0J9YWB2 MIR4767-201ENST00000582827 78 ntBASIC15.59■□□□□ 0.09
TRBV7-9A0A0J9YWB2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC15.59■□□□□ 0.09
TRBV7-9A0A0J9YWB2 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV7-9A0A0J9YWB2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC15.59■□□□□ 0.09
TRBV7-9A0A0J9YWB2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRBV7-9A0A0J9YWB2 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV7-9A0A0J9YWB2 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC15.59■□□□□ 0.09
TRBV7-9A0A0J9YWB2 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV7-9A0A0J9YWB2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC15.59■□□□□ 0.09
TRBV7-9A0A0J9YWB2 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.59■□□□□ 0.09
TRBV7-9A0A0J9YWB2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV7-9A0A0J9YWB2 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC15.58■□□□□ 0.09
TRBV7-9A0A0J9YWB2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRBV7-9A0A0J9YWB2 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRBV7-9A0A0J9YWB2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
TRBV7-9A0A0J9YWB2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC15.58■□□□□ 0.09
TRBV7-9A0A0J9YWB2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV7-9A0A0J9YWB2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TRBV7-9A0A0J9YWB2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV7-9A0A0J9YWB2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV7-9A0A0J9YWB2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC15.58■□□□□ 0.08
TRBV7-9A0A0J9YWB2 AL136116.3-201ENST00000402907 1138 ntBASIC15.58■□□□□ 0.08
TRBV7-9A0A0J9YWB2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC15.58■□□□□ 0.08
TRBV7-9A0A0J9YWB2 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TRBV7-9A0A0J9YWB2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC15.58■□□□□ 0.08
TRBV7-9A0A0J9YWB2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV7-9A0A0J9YWB2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV7-9A0A0J9YWB2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC15.58■□□□□ 0.08
TRBV7-9A0A0J9YWB2 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
TRBV7-9A0A0J9YWB2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV7-9A0A0J9YWB2 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV7-9A0A0J9YWB2 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV7-9A0A0J9YWB2 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
TRBV7-9A0A0J9YWB2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC15.57■□□□□ 0.08
TRBV7-9A0A0J9YWB2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV7-9A0A0J9YWB2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC15.57■□□□□ 0.08
TRBV7-9A0A0J9YWB2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV7-9A0A0J9YWB2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV7-9A0A0J9YWB2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV7-9A0A0J9YWB2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV7-9A0A0J9YWB2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.57■□□□□ 0.08
TRBV7-9A0A0J9YWB2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC15.57■□□□□ 0.08
TRBV7-9A0A0J9YWB2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV7-9A0A0J9YWB2 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TRBV7-9A0A0J9YWB2 AC126544.1-201ENST00000580842 1059 ntBASIC15.57■□□□□ 0.08
TRBV7-9A0A0J9YWB2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC15.57■□□□□ 0.08
TRBV7-9A0A0J9YWB2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC15.57■□□□□ 0.08
TRBV7-9A0A0J9YWB2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV7-9A0A0J9YWB2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV7-9A0A0J9YWB2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms