Protein–RNA interactions for Protein: A0A0B7P3V8

TY4B-P, Transposon Ty4-P Gag-Pol polyprotein, yeast

Predictions only

Length 1,104 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
TY4B-P	A0A0B7P3V8	PRP11	YDL043C	801 nt		4.71	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	YDR134C	YDR134C	411 nt		4.71	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	YHI9	YHR029C	885 nt		4.71	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	GAT4	YIR013C	366 nt		4.71	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	YLR428C	YLR428C	345 nt		4.71	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	YNL198C	YNL198C	303 nt		4.71	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	SSO1	YPL232W	873 nt		4.71	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	FYV5	YCL058C	459 nt		4.71	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	SWC4	YGR002C	1431 nt		4.71	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	APC1	YNL172W	5247 nt		4.7	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	YML096W	YML096W	1578 nt		4.7	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	YOL075C	YOL075C	3885 nt		4.7	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	YGR069W	YGR069W	336 nt		4.7	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	YLR434C	YLR434C	384 nt		4.7	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	YPL107W	YPL107W	747 nt		4.7	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	SEC27	YGL137W	2670 nt		4.7	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	KIN3	YAR018C	1308 nt		4.7	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	URC2	YDR520C	2319 nt		4.69	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	YHR007C-A	YHR007C-A	216 nt		4.69	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	YIL054W	YIL054W	318 nt		4.69	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	YNL184C	YNL184C	327 nt		4.69	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	TCO89	YPL180W	2400 nt		4.69	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	RAD1	YPL022W	3303 nt		4.69	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	ROK1	YGL171W	1695 nt		4.69	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	HRD1	YOL013C	1656 nt		4.69	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	YEL067C	YEL067C	588 nt		4.68	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	NNF1	YJR112W	606 nt		4.68	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	MIM2	YLR099W-A	264 nt		4.68	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	VPS63	YLR261C	327 nt		4.68	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	YLR269C	YLR269C	351 nt		4.68	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	YMR290W-A	YMR290W-A	348 nt		4.68	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	YOR121C	YOR121C	306 nt		4.68	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	YBR032W	YBR032W	303 nt		4.68	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	YOR331C	YOR331C	558 nt		4.68	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	STP1	YDR463W	1560 nt		4.68	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	TPO5	YKL174C	1857 nt		4.68	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	OSH6	YKR003W	1347 nt		4.68	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	SIP1	YDR422C	2448 nt		4.67	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	SEC2	YNL272C	2280 nt		4.67	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	LST4	YKL176C	2487 nt		4.67	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	YDR431W	YDR431W	312 nt		4.67	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	PMI40	YER003C	1290 nt		4.67	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	YML057C-A	YML057C-A	390 nt		4.67	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	TMC1	YOR052C	453 nt		4.67	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	YPR096C	YPR096C	303 nt		4.67	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	APP1	YNL094W	1764 nt		4.67	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	MPS3	YJL019W	2049 nt		4.67	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	CHA4	YLR098C	1947 nt		4.66	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	YMR102C	YMR102C	2505 nt		4.66	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	VID22	YLR373C	2706 nt		4.66	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	LHP1	YDL051W	828 nt		4.66	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	NBL1	YHR199C-A	222 nt		4.66	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	YJR038C	YJR038C	363 nt		4.66	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	YKL068W-A	YKL068W-A	237 nt		4.66	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	YMR304C-A	YMR304C-A	351 nt		4.66	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	OLE1	YGL055W	1533 nt		4.66	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	LYS2	YBR115C	4179 nt		4.65	□□□□□ -1.66
TY4B-P	A0A0B7P3V8	AHC2	YCR082W	387 nt		4.65	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	BLI1	YKL061W	342 nt		4.65	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	ISA1	YLL027W	753 nt		4.65	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	YBL008W-A	YBL008W-A	240 nt		4.65	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	NOP15	YNL110C	663 nt		4.65	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	ATP3	YBR039W	936 nt		4.65	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	YPR039W	YPR039W	336 nt		4.65	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	SHG1	YBR258C	429 nt		4.65	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	POL4	YCR014C	1749 nt		4.65	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	YNR063W	YNR063W	1824 nt		4.65	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	MON1	YGL124C	1935 nt		4.64	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	RAD27	YKL113C	1149 nt		4.64	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	BUD28	YLR062C	378 nt		4.64	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	YOL160W	YOL160W	342 nt		4.64	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	VPS45	YGL095C	1734 nt		4.63	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	AIM21	YIR003W	2040 nt		4.63	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	YMR221C	YMR221C	1515 nt		4.63	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	BSC2	YDR275W	708 nt		4.63	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	MRPL38	YKL170W	417 nt		4.63	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	CDC33	YOL139C	642 nt		4.63	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	YPL276W	YPL276W	438 nt		4.63	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	NHP6A	YPR052C	282 nt		4.63	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	PPQ1	YPL179W	1650 nt		4.63	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	TAF7	YMR227C	1773 nt		4.63	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	GNT1	YOR320C	1476 nt		4.62	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	PAN1	YIR006C	4443 nt		4.62	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	snR59	snR59	78 nt		4.62	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	NOP6	YDL213C	678 nt		4.62	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	RPC11	YDR045C	333 nt		4.62	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	ATP8	Q0080	147 nt		4.62	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	YFL032W	YFL032W	321 nt		4.62	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	Q0143	Q0143	153 nt		4.62	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	YAL044W-A	YAL044W-A	333 nt		4.62	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	UTP11	YKL099C	753 nt		4.62	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	TOM5	YPR133W-A	153 nt		4.62	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	YPS7	YDR349C	1791 nt		4.62	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	DSL1	YNL258C	2265 nt		4.62	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	VPS27	YNR006W	1869 nt		4.62	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	BFR1	YOR198C	1413 nt		4.62	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	ULS1	YOR191W	4860 nt		4.62	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	WHI3	YNL197C	1986 nt		4.62	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	VAC7	YNL054W	3498 nt		4.61	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	RMT2	YDR465C	1239 nt		4.61	□□□□□ -1.67

Retrieved 100 of 7,029 protein–RNA pairs in 65 ms