Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TRAV19A0A0A6YYK7 TSPY20P-201ENST00000450910 630 ntBASIC21.75■■□□□ 1.07
TRAV19A0A0A6YYK7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRAV19A0A0A6YYK7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRAV19A0A0A6YYK7 AC242852.2-201ENST00000615738 1807 ntBASIC21.75■■□□□ 1.07
TRAV19A0A0A6YYK7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TRAV19A0A0A6YYK7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRAV19A0A0A6YYK7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.75■■□□□ 1.07
TRAV19A0A0A6YYK7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.75■■□□□ 1.07
TRAV19A0A0A6YYK7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAV19A0A0A6YYK7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.74■■□□□ 1.07
TRAV19A0A0A6YYK7 AC010980.2-201ENST00000587099 1412 ntBASIC21.74■■□□□ 1.07
TRAV19A0A0A6YYK7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAV19A0A0A6YYK7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAV19A0A0A6YYK7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAV19A0A0A6YYK7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAV19A0A0A6YYK7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAV19A0A0A6YYK7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAV19A0A0A6YYK7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.74■■□□□ 1.07
TRAV19A0A0A6YYK7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.74■■□□□ 1.07
TRAV19A0A0A6YYK7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRAV19A0A0A6YYK7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.74■■□□□ 1.07
TRAV19A0A0A6YYK7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.74■■□□□ 1.07
TRAV19A0A0A6YYK7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAV19A0A0A6YYK7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.74■■□□□ 1.07
TRAV19A0A0A6YYK7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.74■■□□□ 1.07
TRAV19A0A0A6YYK7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAV19A0A0A6YYK7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAV19A0A0A6YYK7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.74■■□□□ 1.07
TRAV19A0A0A6YYK7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAV19A0A0A6YYK7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.73■■□□□ 1.07
TRAV19A0A0A6YYK7 AC068473.5-201ENST00000616428 2072 ntBASIC21.73■■□□□ 1.07
TRAV19A0A0A6YYK7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRAV19A0A0A6YYK7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.73■■□□□ 1.07
TRAV19A0A0A6YYK7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.73■■□□□ 1.07
TRAV19A0A0A6YYK7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRAV19A0A0A6YYK7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRAV19A0A0A6YYK7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.73■■□□□ 1.07
TRAV19A0A0A6YYK7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.73■■□□□ 1.07
TRAV19A0A0A6YYK7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRAV19A0A0A6YYK7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRAV19A0A0A6YYK7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRAV19A0A0A6YYK7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRAV19A0A0A6YYK7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRAV19A0A0A6YYK7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRAV19A0A0A6YYK7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRAV19A0A0A6YYK7 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAV19A0A0A6YYK7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRAV19A0A0A6YYK7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAV19A0A0A6YYK7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.72■■□□□ 1.07
TRAV19A0A0A6YYK7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.72■■□□□ 1.07
TRAV19A0A0A6YYK7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.72■■□□□ 1.07
TRAV19A0A0A6YYK7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRAV19A0A0A6YYK7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAV19A0A0A6YYK7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRAV19A0A0A6YYK7 AC091799.1-201ENST00000422823 811 ntBASIC21.72■■□□□ 1.07
TRAV19A0A0A6YYK7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.72■■□□□ 1.07
TRAV19A0A0A6YYK7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.72■■□□□ 1.07
TRAV19A0A0A6YYK7 TMEM191A-211ENST00000637163 1067 ntBASIC21.72■■□□□ 1.07
TRAV19A0A0A6YYK7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
TRAV19A0A0A6YYK7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TRAV19A0A0A6YYK7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.72■■□□□ 1.07
TRAV19A0A0A6YYK7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRAV19A0A0A6YYK7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAV19A0A0A6YYK7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAV19A0A0A6YYK7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRAV19A0A0A6YYK7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRAV19A0A0A6YYK7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRAV19A0A0A6YYK7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.71■■□□□ 1.07
TRAV19A0A0A6YYK7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRAV19A0A0A6YYK7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
TRAV19A0A0A6YYK7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.71■■□□□ 1.07
TRAV19A0A0A6YYK7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRAV19A0A0A6YYK7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRAV19A0A0A6YYK7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TRAV19A0A0A6YYK7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.71■■□□□ 1.07
TRAV19A0A0A6YYK7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.71■■□□□ 1.07
TRAV19A0A0A6YYK7 CDV3P1-201ENST00000471403 739 ntBASIC21.71■■□□□ 1.07
TRAV19A0A0A6YYK7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.71■■□□□ 1.07
TRAV19A0A0A6YYK7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.71■■□□□ 1.07
TRAV19A0A0A6YYK7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRAV19A0A0A6YYK7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRAV19A0A0A6YYK7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.71■■□□□ 1.07
TRAV19A0A0A6YYK7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
TRAV19A0A0A6YYK7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRAV19A0A0A6YYK7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRAV19A0A0A6YYK7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.7■■□□□ 1.06
TRAV19A0A0A6YYK7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRAV19A0A0A6YYK7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRAV19A0A0A6YYK7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
TRAV19A0A0A6YYK7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.7■■□□□ 1.06
TRAV19A0A0A6YYK7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRAV19A0A0A6YYK7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.7■■□□□ 1.06
TRAV19A0A0A6YYK7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.7■■□□□ 1.06
TRAV19A0A0A6YYK7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
TRAV19A0A0A6YYK7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRAV19A0A0A6YYK7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRAV19A0A0A6YYK7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRAV19A0A0A6YYK7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
TRAV19A0A0A6YYK7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms