Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.99■□□□□ 0.63
TRAV27A0A087WT01 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.99■□□□□ 0.63
TRAV27A0A087WT01 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TRAV27A0A087WT01 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.99■□□□□ 0.63
TRAV27A0A087WT01 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
TRAV27A0A087WT01 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.99■□□□□ 0.63
TRAV27A0A087WT01 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV27A0A087WT01 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV27A0A087WT01 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TRAV27A0A087WT01 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TRAV27A0A087WT01 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV27A0A087WT01 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.99■□□□□ 0.63
TRAV27A0A087WT01 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.98■□□□□ 0.63
TRAV27A0A087WT01 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV27A0A087WT01 AC005224.4-201ENST00000583262 1652 ntBASIC18.98■□□□□ 0.63
TRAV27A0A087WT01 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAV27A0A087WT01 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV27A0A087WT01 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TRAV27A0A087WT01 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAV27A0A087WT01 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.98■□□□□ 0.63
TRAV27A0A087WT01 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TRAV27A0A087WT01 AF213884.3-201ENST00000563833 479 ntBASIC18.98■□□□□ 0.63
TRAV27A0A087WT01 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV27A0A087WT01 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV27A0A087WT01 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAV27A0A087WT01 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV27A0A087WT01 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV27A0A087WT01 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TRAV27A0A087WT01 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV27A0A087WT01 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.98■□□□□ 0.63
TRAV27A0A087WT01 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV27A0A087WT01 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV27A0A087WT01 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TRAV27A0A087WT01 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TRAV27A0A087WT01 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV27A0A087WT01 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TRAV27A0A087WT01 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.97■□□□□ 0.63
TRAV27A0A087WT01 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.97■□□□□ 0.63
TRAV27A0A087WT01 AL355001.2-201ENST00000620617 1191 ntBASIC18.97■□□□□ 0.63
TRAV27A0A087WT01 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV27A0A087WT01 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV27A0A087WT01 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV27A0A087WT01 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV27A0A087WT01 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV27A0A087WT01 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV27A0A087WT01 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV27A0A087WT01 RASA4CP-201ENST00000424092 1398 ntBASIC18.96■□□□□ 0.63
TRAV27A0A087WT01 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.96■□□□□ 0.63
TRAV27A0A087WT01 BX005040.4-201ENST00000637145 1518 ntBASIC18.96■□□□□ 0.63
TRAV27A0A087WT01 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV27A0A087WT01 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV27A0A087WT01 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TRAV27A0A087WT01 MIR939-201ENST00000401314 82 ntBASIC18.96■□□□□ 0.63
TRAV27A0A087WT01 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV27A0A087WT01 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.96■□□□□ 0.63
TRAV27A0A087WT01 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV27A0A087WT01 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TRAV27A0A087WT01 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV27A0A087WT01 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV27A0A087WT01 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.96■□□□□ 0.63
TRAV27A0A087WT01 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV27A0A087WT01 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV27A0A087WT01 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV27A0A087WT01 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.96■□□□□ 0.63
TRAV27A0A087WT01 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV27A0A087WT01 SLC25A24-204ENST00000569674 2357 ntBASIC18.96■□□□□ 0.63
TRAV27A0A087WT01 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV27A0A087WT01 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV27A0A087WT01 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV27A0A087WT01 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.95■□□□□ 0.62
TRAV27A0A087WT01 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TRAV27A0A087WT01 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV27A0A087WT01 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.95■□□□□ 0.62
TRAV27A0A087WT01 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV27A0A087WT01 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV27A0A087WT01 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV27A0A087WT01 MIR572-201ENST00000384983 95 ntBASIC18.95■□□□□ 0.62
TRAV27A0A087WT01 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.95■□□□□ 0.62
TRAV27A0A087WT01 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.95■□□□□ 0.62
TRAV27A0A087WT01 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV27A0A087WT01 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV27A0A087WT01 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.95■□□□□ 0.62
TRAV27A0A087WT01 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV27A0A087WT01 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV27A0A087WT01 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TRAV27A0A087WT01 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV27A0A087WT01 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV27A0A087WT01 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV27A0A087WT01 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV27A0A087WT01 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV27A0A087WT01 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAV27A0A087WT01 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.94■□□□□ 0.62
TRAV27A0A087WT01 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV27A0A087WT01 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.94■□□□□ 0.62
TRAV27A0A087WT01 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAV27A0A087WT01 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TRAV27A0A087WT01 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TRAV27A0A087WT01 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV27A0A087WT01 LINC01006-201ENST00000333319 2292 ntBASIC18.94■□□□□ 0.62
TRAV27A0A087WT01 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms