Protein–RNA interactions for Protein: Q9Y6M7

SLC4A7, Sodium bicarbonate cotransporter 3, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A7Q9Y6M7 DUX4L11-201ENST00000611504 1267 ntBASIC29.47■■■□□ 2.31
SLC4A7Q9Y6M7 DUX4L12-201ENST00000614593 1267 ntBASIC29.47■■■□□ 2.31
SLC4A7Q9Y6M7 DUX4L14-201ENST00000621227 1267 ntBASIC29.47■■■□□ 2.31
SLC4A7Q9Y6M7 MIR6090-201ENST00000622481 60 ntBASIC29.47■■■□□ 2.31
SLC4A7Q9Y6M7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC29.45■■■□□ 2.31
SLC4A7Q9Y6M7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC29.45■■■□□ 2.31
SLC4A7Q9Y6M7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SLC4A7Q9Y6M7 LINC01971-201ENST00000617888 1048 ntBASIC29.44■■■□□ 2.3
SLC4A7Q9Y6M7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
SLC4A7Q9Y6M7 CR559946.2-201ENST00000623684 991 ntBASIC29.43■■■□□ 2.3
SLC4A7Q9Y6M7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC29.41■■■□□ 2.3
SLC4A7Q9Y6M7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
SLC4A7Q9Y6M7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC29.4■■■□□ 2.3
SLC4A7Q9Y6M7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SLC4A7Q9Y6M7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SLC4A7Q9Y6M7 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SLC4A7Q9Y6M7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC29.39■■■□□ 2.3
SLC4A7Q9Y6M7 ABHD17AP3-201ENST00000503096 1137 ntBASIC29.39■■■□□ 2.3
SLC4A7Q9Y6M7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC29.39■■■□□ 2.3
SLC4A7Q9Y6M7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SLC4A7Q9Y6M7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.38■■■□□ 2.29
SLC4A7Q9Y6M7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
SLC4A7Q9Y6M7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC29.35■■■□□ 2.29
SLC4A7Q9Y6M7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.35■■■□□ 2.29
SLC4A7Q9Y6M7 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SLC4A7Q9Y6M7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SLC4A7Q9Y6M7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SLC4A7Q9Y6M7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC29.34■■■□□ 2.29
SLC4A7Q9Y6M7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
SLC4A7Q9Y6M7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC29.32■■■□□ 2.28
SLC4A7Q9Y6M7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SLC4A7Q9Y6M7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SLC4A7Q9Y6M7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SLC4A7Q9Y6M7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SLC4A7Q9Y6M7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SLC4A7Q9Y6M7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
SLC4A7Q9Y6M7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC29.29■■■□□ 2.28
SLC4A7Q9Y6M7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
SLC4A7Q9Y6M7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
SLC4A7Q9Y6M7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
SLC4A7Q9Y6M7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC29.27■■■□□ 2.28
SLC4A7Q9Y6M7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC29.26■■■□□ 2.27
SLC4A7Q9Y6M7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
SLC4A7Q9Y6M7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
SLC4A7Q9Y6M7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
SLC4A7Q9Y6M7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC29.22■■■□□ 2.27
SLC4A7Q9Y6M7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC29.22■■■□□ 2.27
SLC4A7Q9Y6M7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
SLC4A7Q9Y6M7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC29.21■■■□□ 2.27
SLC4A7Q9Y6M7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
SLC4A7Q9Y6M7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC29.2■■■□□ 2.26
SLC4A7Q9Y6M7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
SLC4A7Q9Y6M7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC29.2■■■□□ 2.26
SLC4A7Q9Y6M7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
SLC4A7Q9Y6M7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC29.19■■■□□ 2.26
SLC4A7Q9Y6M7 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
SLC4A7Q9Y6M7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC29.18■■■□□ 2.26
SLC4A7Q9Y6M7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
SLC4A7Q9Y6M7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
SLC4A7Q9Y6M7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC29.16■■■□□ 2.26
SLC4A7Q9Y6M7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC29.15■■■□□ 2.26
SLC4A7Q9Y6M7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
SLC4A7Q9Y6M7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC29.15■■■□□ 2.26
SLC4A7Q9Y6M7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC29.15■■■□□ 2.26
SLC4A7Q9Y6M7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC29.14■■■□□ 2.26
SLC4A7Q9Y6M7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.14■■■□□ 2.26
SLC4A7Q9Y6M7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
SLC4A7Q9Y6M7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
SLC4A7Q9Y6M7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
SLC4A7Q9Y6M7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC29.11■■■□□ 2.25
SLC4A7Q9Y6M7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
SLC4A7Q9Y6M7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
SLC4A7Q9Y6M7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
SLC4A7Q9Y6M7 DUX4L13-201ENST00000554103 1267 ntBASIC29.09■■■□□ 2.25
SLC4A7Q9Y6M7 DUX4L15-201ENST00000611059 1267 ntBASIC29.09■■■□□ 2.25
SLC4A7Q9Y6M7 DUX4L23-201ENST00000615195 1269 ntBASIC29.09■■■□□ 2.25
SLC4A7Q9Y6M7 DUX4L24-201ENST00000617576 1269 ntBASIC29.09■■■□□ 2.25
SLC4A7Q9Y6M7 DUX4L22-201ENST00000618238 1269 ntBASIC29.09■■■□□ 2.25
SLC4A7Q9Y6M7 DUX4L20-201ENST00000619712 1269 ntBASIC29.09■■■□□ 2.25
SLC4A7Q9Y6M7 DUX4L21-201ENST00000622058 1269 ntBASIC29.09■■■□□ 2.25
SLC4A7Q9Y6M7 DUX4L10-201ENST00000622460 1267 ntBASIC29.09■■■□□ 2.25
SLC4A7Q9Y6M7 DUX4L25-201ENST00000624915 1269 ntBASIC29.09■■■□□ 2.25
SLC4A7Q9Y6M7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC29.09■■■□□ 2.25
SLC4A7Q9Y6M7 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC29.08■■■□□ 2.25
SLC4A7Q9Y6M7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
SLC4A7Q9Y6M7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC29.07■■■□□ 2.24
SLC4A7Q9Y6M7 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC29.06■■■□□ 2.24
SLC4A7Q9Y6M7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
SLC4A7Q9Y6M7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC29.05■■■□□ 2.24
SLC4A7Q9Y6M7 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
SLC4A7Q9Y6M7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
SLC4A7Q9Y6M7 HES6-205ENST00000409356 528 ntTSL 2 BASIC29.04■■■□□ 2.24
SLC4A7Q9Y6M7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
SLC4A7Q9Y6M7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
SLC4A7Q9Y6M7 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.03■■■□□ 2.24
SLC4A7Q9Y6M7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC29.02■■■□□ 2.24
SLC4A7Q9Y6M7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC29.02■■■□□ 2.24
SLC4A7Q9Y6M7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
SLC4A7Q9Y6M7 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
SLC4A7Q9Y6M7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms