Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SPCS1Q9Y6A9 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SPCS1Q9Y6A9 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC18.55■□□□□ 0.56
SPCS1Q9Y6A9 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPCS1Q9Y6A9 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SPCS1Q9Y6A9 AC142086.6-201ENST00000621154 1765 ntBASIC18.55■□□□□ 0.56
SPCS1Q9Y6A9 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.55■□□□□ 0.56
SPCS1Q9Y6A9 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPCS1Q9Y6A9 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SPCS1Q9Y6A9 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SPCS1Q9Y6A9 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SPCS1Q9Y6A9 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPCS1Q9Y6A9 AC145285.7-201ENST00000614819 1539 ntBASIC18.54■□□□□ 0.56
SPCS1Q9Y6A9 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC18.53■□□□□ 0.56
SPCS1Q9Y6A9 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.53■□□□□ 0.56
SPCS1Q9Y6A9 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPCS1Q9Y6A9 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPCS1Q9Y6A9 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.53■□□□□ 0.56
SPCS1Q9Y6A9 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.52■□□□□ 0.56
SPCS1Q9Y6A9 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SPCS1Q9Y6A9 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SPCS1Q9Y6A9 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.51■□□□□ 0.55
SPCS1Q9Y6A9 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
SPCS1Q9Y6A9 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SPCS1Q9Y6A9 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPCS1Q9Y6A9 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPCS1Q9Y6A9 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC18.49■□□□□ 0.55
SPCS1Q9Y6A9 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SPCS1Q9Y6A9 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SPCS1Q9Y6A9 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SPCS1Q9Y6A9 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SPCS1Q9Y6A9 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SPCS1Q9Y6A9 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SPCS1Q9Y6A9 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SPCS1Q9Y6A9 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SPCS1Q9Y6A9 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SPCS1Q9Y6A9 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SPCS1Q9Y6A9 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPCS1Q9Y6A9 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPCS1Q9Y6A9 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
SPCS1Q9Y6A9 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SPCS1Q9Y6A9 AL121749.1-202ENST00000609313 2153 ntBASIC18.45■□□□□ 0.54
SPCS1Q9Y6A9 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
SPCS1Q9Y6A9 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPCS1Q9Y6A9 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPCS1Q9Y6A9 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SPCS1Q9Y6A9 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPCS1Q9Y6A9 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SPCS1Q9Y6A9 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
SPCS1Q9Y6A9 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SPCS1Q9Y6A9 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SPCS1Q9Y6A9 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.42■□□□□ 0.54
SPCS1Q9Y6A9 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SPCS1Q9Y6A9 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SPCS1Q9Y6A9 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SPCS1Q9Y6A9 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SPCS1Q9Y6A9 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SPCS1Q9Y6A9 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC18.41■□□□□ 0.54
SPCS1Q9Y6A9 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SPCS1Q9Y6A9 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
SPCS1Q9Y6A9 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SPCS1Q9Y6A9 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC18.4■□□□□ 0.54
SPCS1Q9Y6A9 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPCS1Q9Y6A9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.4■□□□□ 0.54
SPCS1Q9Y6A9 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SPCS1Q9Y6A9 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SPCS1Q9Y6A9 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SPCS1Q9Y6A9 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPCS1Q9Y6A9 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SPCS1Q9Y6A9 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPCS1Q9Y6A9 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPCS1Q9Y6A9 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPCS1Q9Y6A9 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPCS1Q9Y6A9 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.38■□□□□ 0.53
SPCS1Q9Y6A9 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC18.38■□□□□ 0.53
SPCS1Q9Y6A9 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SPCS1Q9Y6A9 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SPCS1Q9Y6A9 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SPCS1Q9Y6A9 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SPCS1Q9Y6A9 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SPCS1Q9Y6A9 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPCS1Q9Y6A9 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPCS1Q9Y6A9 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPCS1Q9Y6A9 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPCS1Q9Y6A9 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SPCS1Q9Y6A9 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC18.34■□□□□ 0.53
SPCS1Q9Y6A9 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC18.33■□□□□ 0.53
SPCS1Q9Y6A9 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SPCS1Q9Y6A9 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.33■□□□□ 0.52
SPCS1Q9Y6A9 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPCS1Q9Y6A9 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SPCS1Q9Y6A9 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
SPCS1Q9Y6A9 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SPCS1Q9Y6A9 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SPCS1Q9Y6A9 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SPCS1Q9Y6A9 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPCS1Q9Y6A9 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC18.31■□□□□ 0.52
SPCS1Q9Y6A9 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SPCS1Q9Y6A9 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPCS1Q9Y6A9 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms