Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
S1PR3Q99500 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
S1PR3Q99500 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
S1PR3Q99500 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
S1PR3Q99500 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
S1PR3Q99500 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
S1PR3Q99500 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
S1PR3Q99500 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
S1PR3Q99500 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
S1PR3Q99500 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.78■■□□□ 1.08
S1PR3Q99500 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
S1PR3Q99500 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.78■■□□□ 1.08
S1PR3Q99500 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
S1PR3Q99500 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
S1PR3Q99500 ABCB10P3-201ENST00000561950 2166 ntBASIC21.77■■□□□ 1.08
S1PR3Q99500 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
S1PR3Q99500 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
S1PR3Q99500 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
S1PR3Q99500 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
S1PR3Q99500 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
S1PR3Q99500 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
S1PR3Q99500 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
S1PR3Q99500 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
S1PR3Q99500 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.75■■□□□ 1.07
S1PR3Q99500 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
S1PR3Q99500 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
S1PR3Q99500 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
S1PR3Q99500 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
S1PR3Q99500 AC097358.2-201ENST00000607541 1159 ntBASIC21.74■■□□□ 1.07
S1PR3Q99500 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.74■■□□□ 1.07
S1PR3Q99500 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
S1PR3Q99500 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
S1PR3Q99500 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
S1PR3Q99500 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
S1PR3Q99500 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
S1PR3Q99500 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
S1PR3Q99500 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
S1PR3Q99500 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
S1PR3Q99500 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
S1PR3Q99500 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
S1PR3Q99500 ST7-AS1-201ENST00000456775 1889 ntBASIC21.72■■□□□ 1.07
S1PR3Q99500 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
S1PR3Q99500 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
S1PR3Q99500 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21.71■■□□□ 1.07
S1PR3Q99500 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
S1PR3Q99500 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.7■■□□□ 1.06
S1PR3Q99500 AC136428.2-201ENST00000563187 214 ntBASIC21.7■■□□□ 1.06
S1PR3Q99500 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
S1PR3Q99500 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
S1PR3Q99500 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.69■■□□□ 1.06
S1PR3Q99500 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.68■■□□□ 1.06
S1PR3Q99500 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
S1PR3Q99500 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.68■■□□□ 1.06
S1PR3Q99500 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.67■■□□□ 1.06
S1PR3Q99500 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
S1PR3Q99500 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
S1PR3Q99500 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
S1PR3Q99500 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
S1PR3Q99500 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.66■■□□□ 1.06
S1PR3Q99500 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
S1PR3Q99500 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
S1PR3Q99500 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
S1PR3Q99500 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
S1PR3Q99500 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
S1PR3Q99500 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
S1PR3Q99500 AL135925.1-201ENST00000605920 1701 ntBASIC21.65■■□□□ 1.06
S1PR3Q99500 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
S1PR3Q99500 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
S1PR3Q99500 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.64■■□□□ 1.05
S1PR3Q99500 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
S1PR3Q99500 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
S1PR3Q99500 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
S1PR3Q99500 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
S1PR3Q99500 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
S1PR3Q99500 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.62■■□□□ 1.05
S1PR3Q99500 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
S1PR3Q99500 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
S1PR3Q99500 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
S1PR3Q99500 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
S1PR3Q99500 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
S1PR3Q99500 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
S1PR3Q99500 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.61■■□□□ 1.05
S1PR3Q99500 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
S1PR3Q99500 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.6■■□□□ 1.05
S1PR3Q99500 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
S1PR3Q99500 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
S1PR3Q99500 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
S1PR3Q99500 AC139426.1-201ENST00000568218 2529 ntBASIC21.59■■□□□ 1.05
S1PR3Q99500 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
S1PR3Q99500 CAHM-201ENST00000604200 896 ntBASIC21.58■■□□□ 1.05
S1PR3Q99500 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
S1PR3Q99500 AL391121.1-201ENST00000607967 1349 ntBASIC21.57■■□□□ 1.04
S1PR3Q99500 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
S1PR3Q99500 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
S1PR3Q99500 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.56■■□□□ 1.04
S1PR3Q99500 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
S1PR3Q99500 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
S1PR3Q99500 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
S1PR3Q99500 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
S1PR3Q99500 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms