Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC29.08■■■□□ 2.25
CASD1Q96PB1 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
CASD1Q96PB1 AC021231.2-201ENST00000594613 730 ntBASIC29.08■■■□□ 2.25
CASD1Q96PB1 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
CASD1Q96PB1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC29.07■■■□□ 2.24
CASD1Q96PB1 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CASD1Q96PB1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC29.05■■■□□ 2.24
CASD1Q96PB1 MIR6090-201ENST00000622481 60 ntBASIC29.05■■■□□ 2.24
CASD1Q96PB1 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
CASD1Q96PB1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC29.04■■■□□ 2.24
CASD1Q96PB1 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
CASD1Q96PB1 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
CASD1Q96PB1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
CASD1Q96PB1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
CASD1Q96PB1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC29.03■■■□□ 2.24
CASD1Q96PB1 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC29.03■■■□□ 2.24
CASD1Q96PB1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC29.02■■■□□ 2.24
CASD1Q96PB1 AC108673.1-201ENST00000510422 1159 ntBASIC29.02■■■□□ 2.24
CASD1Q96PB1 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
CASD1Q96PB1 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC29■■■□□ 2.23
CASD1Q96PB1 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC29■■■□□ 2.23
CASD1Q96PB1 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC29■■■□□ 2.23
CASD1Q96PB1 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
CASD1Q96PB1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
CASD1Q96PB1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
CASD1Q96PB1 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
CASD1Q96PB1 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
CASD1Q96PB1 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
CASD1Q96PB1 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC28.96■■■□□ 2.23
CASD1Q96PB1 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
CASD1Q96PB1 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
CASD1Q96PB1 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
CASD1Q96PB1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC28.94■■■□□ 2.22
CASD1Q96PB1 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
CASD1Q96PB1 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
CASD1Q96PB1 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC28.93■■■□□ 2.22
CASD1Q96PB1 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC28.93■■■□□ 2.22
CASD1Q96PB1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
CASD1Q96PB1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.92■■■□□ 2.22
CASD1Q96PB1 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CASD1Q96PB1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC28.91■■■□□ 2.22
CASD1Q96PB1 AC120057.4-201ENST00000624722 1615 ntBASIC28.9■■■□□ 2.22
CASD1Q96PB1 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC28.88■■■□□ 2.21
CASD1Q96PB1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.85■■■□□ 2.21
CASD1Q96PB1 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC28.84■■■□□ 2.21
CASD1Q96PB1 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC28.84■■■□□ 2.21
CASD1Q96PB1 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC28.83■■■□□ 2.21
CASD1Q96PB1 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC28.83■■■□□ 2.21
CASD1Q96PB1 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CASD1Q96PB1 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC28.82■■■□□ 2.2
CASD1Q96PB1 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC28.82■■■□□ 2.2
CASD1Q96PB1 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC28.82■■■□□ 2.2
CASD1Q96PB1 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC28.81■■■□□ 2.2
CASD1Q96PB1 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CASD1Q96PB1 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC28.8■■■□□ 2.2
CASD1Q96PB1 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CASD1Q96PB1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.8■■■□□ 2.2
CASD1Q96PB1 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CASD1Q96PB1 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC28.8■■■□□ 2.2
CASD1Q96PB1 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC28.79■■■□□ 2.2
CASD1Q96PB1 MIR639-201ENST00000384974 98 ntBASIC28.79■■■□□ 2.2
CASD1Q96PB1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CASD1Q96PB1 MIR4449-201ENST00000578365 66 ntBASIC28.78■■■□□ 2.2
CASD1Q96PB1 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC28.77■■■□□ 2.2
CASD1Q96PB1 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
CASD1Q96PB1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC28.77■■■□□ 2.2
CASD1Q96PB1 MIR3648-2-201ENST00000581792 180 ntBASIC28.77■■■□□ 2.2
CASD1Q96PB1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CASD1Q96PB1 MIR3648-1-201ENST00000615959 180 ntBASIC28.77■■■□□ 2.2
CASD1Q96PB1 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC28.75■■■□□ 2.19
CASD1Q96PB1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC28.75■■■□□ 2.19
CASD1Q96PB1 LINC01971-201ENST00000617888 1048 ntBASIC28.75■■■□□ 2.19
CASD1Q96PB1 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC28.74■■■□□ 2.19
CASD1Q96PB1 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CASD1Q96PB1 AC016575.1-201ENST00000607026 382 ntBASIC28.74■■■□□ 2.19
CASD1Q96PB1 DUX4L11-201ENST00000611504 1267 ntBASIC28.74■■■□□ 2.19
CASD1Q96PB1 DUX4L12-201ENST00000614593 1267 ntBASIC28.74■■■□□ 2.19
CASD1Q96PB1 DUX4L14-201ENST00000621227 1267 ntBASIC28.74■■■□□ 2.19
CASD1Q96PB1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC28.74■■■□□ 2.19
CASD1Q96PB1 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CASD1Q96PB1 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC28.72■■■□□ 2.19
CASD1Q96PB1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC28.72■■■□□ 2.19
CASD1Q96PB1 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
CASD1Q96PB1 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.7■■■□□ 2.18
CASD1Q96PB1 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
CASD1Q96PB1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
CASD1Q96PB1 CR559946.2-201ENST00000623684 991 ntBASIC28.67■■■□□ 2.18
CASD1Q96PB1 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CASD1Q96PB1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC28.65■■■□□ 2.18
CASD1Q96PB1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC28.64■■■□□ 2.18
CASD1Q96PB1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC28.64■■■□□ 2.18
CASD1Q96PB1 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
CASD1Q96PB1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CASD1Q96PB1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.63■■■□□ 2.17
CASD1Q96PB1 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.63■■■□□ 2.17
CASD1Q96PB1 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
CASD1Q96PB1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
CASD1Q96PB1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CASD1Q96PB1 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CASD1Q96PB1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC28.62■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms