Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHCHD1Q96BP2 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CHCHD1Q96BP2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHCHD1Q96BP2 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHCHD1Q96BP2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CHCHD1Q96BP2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHCHD1Q96BP2 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHCHD1Q96BP2 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CHCHD1Q96BP2 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHCHD1Q96BP2 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CHCHD1Q96BP2 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHCHD1Q96BP2 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHCHD1Q96BP2 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CHCHD1Q96BP2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHCHD1Q96BP2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CHCHD1Q96BP2 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CHCHD1Q96BP2 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC19.57■□□□□ 0.72
CHCHD1Q96BP2 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHCHD1Q96BP2 AL121749.1-202ENST00000609313 2153 ntBASIC19.56■□□□□ 0.72
CHCHD1Q96BP2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHCHD1Q96BP2 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHCHD1Q96BP2 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHCHD1Q96BP2 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CHCHD1Q96BP2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHCHD1Q96BP2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHCHD1Q96BP2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHCHD1Q96BP2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHCHD1Q96BP2 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHCHD1Q96BP2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHCHD1Q96BP2 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CHCHD1Q96BP2 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CHCHD1Q96BP2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CHCHD1Q96BP2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CHCHD1Q96BP2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.51■□□□□ 0.71
CHCHD1Q96BP2 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHCHD1Q96BP2 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CHCHD1Q96BP2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHCHD1Q96BP2 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHCHD1Q96BP2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.49■□□□□ 0.71
CHCHD1Q96BP2 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHCHD1Q96BP2 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC19.48■□□□□ 0.71
CHCHD1Q96BP2 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHCHD1Q96BP2 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CHCHD1Q96BP2 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHCHD1Q96BP2 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CHCHD1Q96BP2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHCHD1Q96BP2 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHCHD1Q96BP2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHCHD1Q96BP2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHCHD1Q96BP2 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHCHD1Q96BP2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHCHD1Q96BP2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHCHD1Q96BP2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHCHD1Q96BP2 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC19.43■□□□□ 0.7
CHCHD1Q96BP2 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
CHCHD1Q96BP2 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHCHD1Q96BP2 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHCHD1Q96BP2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHCHD1Q96BP2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHCHD1Q96BP2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CHCHD1Q96BP2 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CHCHD1Q96BP2 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHCHD1Q96BP2 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CHCHD1Q96BP2 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHCHD1Q96BP2 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHCHD1Q96BP2 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CHCHD1Q96BP2 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHCHD1Q96BP2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHCHD1Q96BP2 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHCHD1Q96BP2 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC19.38■□□□□ 0.69
CHCHD1Q96BP2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.38■□□□□ 0.69
CHCHD1Q96BP2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CHCHD1Q96BP2 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHCHD1Q96BP2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHCHD1Q96BP2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHCHD1Q96BP2 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHCHD1Q96BP2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19.37■□□□□ 0.69
CHCHD1Q96BP2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHCHD1Q96BP2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CHCHD1Q96BP2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHCHD1Q96BP2 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHCHD1Q96BP2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHCHD1Q96BP2 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.33■□□□□ 0.69
CHCHD1Q96BP2 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.33■□□□□ 0.69
CHCHD1Q96BP2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHCHD1Q96BP2 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHCHD1Q96BP2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHCHD1Q96BP2 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CHCHD1Q96BP2 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CHCHD1Q96BP2 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHCHD1Q96BP2 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CHCHD1Q96BP2 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHCHD1Q96BP2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.29■□□□□ 0.68
CHCHD1Q96BP2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.29■□□□□ 0.68
CHCHD1Q96BP2 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CHCHD1Q96BP2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.29■□□□□ 0.68
CHCHD1Q96BP2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
CHCHD1Q96BP2 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHCHD1Q96BP2 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHCHD1Q96BP2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 8.7 ms