Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CPSF7Q8N684 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CPSF7Q8N684 AL161658.1-201ENST00000623641 1967 ntBASIC25.98■■□□□ 1.75
CPSF7Q8N684 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
CPSF7Q8N684 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CPSF7Q8N684 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
CPSF7Q8N684 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CPSF7Q8N684 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.97■■□□□ 1.75
CPSF7Q8N684 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CPSF7Q8N684 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.95■■□□□ 1.74
CPSF7Q8N684 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
CPSF7Q8N684 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CPSF7Q8N684 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
CPSF7Q8N684 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
CPSF7Q8N684 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.92■■□□□ 1.74
CPSF7Q8N684 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CPSF7Q8N684 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC25.92■■□□□ 1.74
CPSF7Q8N684 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CPSF7Q8N684 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
CPSF7Q8N684 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CPSF7Q8N684 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
CPSF7Q8N684 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CPSF7Q8N684 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CPSF7Q8N684 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CPSF7Q8N684 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CPSF7Q8N684 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.89■■□□□ 1.74
CPSF7Q8N684 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CPSF7Q8N684 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.88■■□□□ 1.73
CPSF7Q8N684 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC25.88■■□□□ 1.73
CPSF7Q8N684 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CPSF7Q8N684 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.87■■□□□ 1.73
CPSF7Q8N684 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC25.86■■□□□ 1.73
CPSF7Q8N684 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CPSF7Q8N684 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CPSF7Q8N684 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CPSF7Q8N684 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.84■■□□□ 1.73
CPSF7Q8N684 KLF16-203ENST00000592313 508 ntTSL 3 BASIC25.84■■□□□ 1.73
CPSF7Q8N684 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CPSF7Q8N684 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CPSF7Q8N684 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CPSF7Q8N684 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
CPSF7Q8N684 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.72
CPSF7Q8N684 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CPSF7Q8N684 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.82■■□□□ 1.72
CPSF7Q8N684 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.82■■□□□ 1.72
CPSF7Q8N684 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CPSF7Q8N684 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CPSF7Q8N684 AL135925.1-201ENST00000605920 1701 ntBASIC25.8■■□□□ 1.72
CPSF7Q8N684 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC25.8■■□□□ 1.72
CPSF7Q8N684 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CPSF7Q8N684 SETD8P1-201ENST00000623146 1180 ntBASIC25.79■■□□□ 1.72
CPSF7Q8N684 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25.79■■□□□ 1.72
CPSF7Q8N684 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC25.78■■□□□ 1.72
CPSF7Q8N684 AC142086.6-201ENST00000621154 1765 ntBASIC25.77■■□□□ 1.72
CPSF7Q8N684 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.77■■□□□ 1.72
CPSF7Q8N684 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CPSF7Q8N684 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CPSF7Q8N684 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.76■■□□□ 1.71
CPSF7Q8N684 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CPSF7Q8N684 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CPSF7Q8N684 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC25.75■■□□□ 1.71
CPSF7Q8N684 AC097358.2-201ENST00000607541 1159 ntBASIC25.75■■□□□ 1.71
CPSF7Q8N684 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.75■■□□□ 1.71
CPSF7Q8N684 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25.74■■□□□ 1.71
CPSF7Q8N684 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC25.74■■□□□ 1.71
CPSF7Q8N684 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CPSF7Q8N684 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
CPSF7Q8N684 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CPSF7Q8N684 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
CPSF7Q8N684 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CPSF7Q8N684 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.72■■□□□ 1.71
CPSF7Q8N684 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.72■■□□□ 1.71
CPSF7Q8N684 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
CPSF7Q8N684 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CPSF7Q8N684 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CPSF7Q8N684 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
CPSF7Q8N684 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
CPSF7Q8N684 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CPSF7Q8N684 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.7■■□□□ 1.7
CPSF7Q8N684 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
CPSF7Q8N684 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CPSF7Q8N684 AC136428.2-201ENST00000563187 214 ntBASIC25.69■■□□□ 1.7
CPSF7Q8N684 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CPSF7Q8N684 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
CPSF7Q8N684 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
CPSF7Q8N684 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CPSF7Q8N684 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CPSF7Q8N684 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CPSF7Q8N684 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CPSF7Q8N684 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CPSF7Q8N684 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CPSF7Q8N684 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CPSF7Q8N684 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CPSF7Q8N684 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CPSF7Q8N684 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CPSF7Q8N684 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
CPSF7Q8N684 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.64■■□□□ 1.7
CPSF7Q8N684 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CPSF7Q8N684 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CPSF7Q8N684 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms