Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC34.05■■■■□ 3.04
Col16a1Q8BLX7 Gm2415-204ENSMUST00000190235 2004 ntBASIC34.05■■■■□ 3.04
Col16a1Q8BLX7 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC34.04■■■■□ 3.04
Col16a1Q8BLX7 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC34.03■■■■□ 3.04
Col16a1Q8BLX7 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC34.03■■■■□ 3.04
Col16a1Q8BLX7 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
Col16a1Q8BLX7 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.04
Col16a1Q8BLX7 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
Col16a1Q8BLX7 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC34■■■■□ 3.03
Col16a1Q8BLX7 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC34■■■■□ 3.03
Col16a1Q8BLX7 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
Col16a1Q8BLX7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
Col16a1Q8BLX7 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC34■■■■□ 3.03
Col16a1Q8BLX7 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC33.99■■■■□ 3.03
Col16a1Q8BLX7 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
Col16a1Q8BLX7 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC33.98■■■■□ 3.03
Col16a1Q8BLX7 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC33.98■■■■□ 3.03
Col16a1Q8BLX7 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
Col16a1Q8BLX7 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC33.97■■■■□ 3.03
Col16a1Q8BLX7 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC33.96■■■■□ 3.03
Col16a1Q8BLX7 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC33.96■■■■□ 3.03
Col16a1Q8BLX7 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC33.95■■■■□ 3.03
Col16a1Q8BLX7 Nkain2-201ENSMUST00000092602 558 ntBASIC33.95■■■■□ 3.03
Col16a1Q8BLX7 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC33.93■■■■□ 3.02
Col16a1Q8BLX7 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC33.93■■■■□ 3.02
Col16a1Q8BLX7 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC33.92■■■■□ 3.02
Col16a1Q8BLX7 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC33.92■■■■□ 3.02
Col16a1Q8BLX7 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC33.9■■■■□ 3.02
Col16a1Q8BLX7 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC33.89■■■■□ 3.02
Col16a1Q8BLX7 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC33.88■■■■□ 3.01
Col16a1Q8BLX7 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
Col16a1Q8BLX7 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC33.88■■■■□ 3.01
Col16a1Q8BLX7 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC33.87■■■■□ 3.01
Col16a1Q8BLX7 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
Col16a1Q8BLX7 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC33.85■■■■□ 3.01
Col16a1Q8BLX7 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC33.83■■■■□ 3.01
Col16a1Q8BLX7 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3
Col16a1Q8BLX7 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
Col16a1Q8BLX7 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC33.81■■■■□ 3
Col16a1Q8BLX7 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
Col16a1Q8BLX7 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC33.79■■■■□ 3
Col16a1Q8BLX7 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC33.78■■■■□ 3
Col16a1Q8BLX7 Gm7432-201ENSMUST00000210343 879 ntBASIC33.78■■■■□ 3
Col16a1Q8BLX7 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC33.78■■■■□ 3
Col16a1Q8BLX7 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC33.77■■■■□ 3
Col16a1Q8BLX7 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC33.75■■■□□ 2.99
Col16a1Q8BLX7 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC33.74■■■□□ 2.99
Col16a1Q8BLX7 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC33.74■■■□□ 2.99
Col16a1Q8BLX7 Gm6658-202ENSMUST00000209493 1885 ntBASIC33.74■■■□□ 2.99
Col16a1Q8BLX7 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC33.74■■■□□ 2.99
Col16a1Q8BLX7 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC33.72■■■□□ 2.99
Col16a1Q8BLX7 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC33.72■■■□□ 2.99
Col16a1Q8BLX7 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC33.72■■■□□ 2.99
Col16a1Q8BLX7 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
Col16a1Q8BLX7 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC33.71■■■□□ 2.99
Col16a1Q8BLX7 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC33.69■■■□□ 2.98
Col16a1Q8BLX7 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC33.69■■■□□ 2.98
Col16a1Q8BLX7 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC33.68■■■□□ 2.98
Col16a1Q8BLX7 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC33.68■■■□□ 2.98
Col16a1Q8BLX7 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC33.68■■■□□ 2.98
Col16a1Q8BLX7 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
Col16a1Q8BLX7 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
Col16a1Q8BLX7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC33.65■■■□□ 2.98
Col16a1Q8BLX7 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC33.61■■■□□ 2.97
Col16a1Q8BLX7 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC33.61■■■□□ 2.97
Col16a1Q8BLX7 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC33.6■■■□□ 2.97
Col16a1Q8BLX7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC33.6■■■□□ 2.97
Col16a1Q8BLX7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC33.59■■■□□ 2.97
Col16a1Q8BLX7 Gm11599-201ENSMUST00000118720 878 ntBASIC33.59■■■□□ 2.97
Col16a1Q8BLX7 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC33.59■■■□□ 2.97
Col16a1Q8BLX7 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC33.56■■■□□ 2.96
Col16a1Q8BLX7 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC33.56■■■□□ 2.96
Col16a1Q8BLX7 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
Col16a1Q8BLX7 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC33.55■■■□□ 2.96
Col16a1Q8BLX7 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC33.55■■■□□ 2.96
Col16a1Q8BLX7 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC33.55■■■□□ 2.96
Col16a1Q8BLX7 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC33.54■■■□□ 2.96
Col16a1Q8BLX7 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC33.54■■■□□ 2.96
Col16a1Q8BLX7 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
Col16a1Q8BLX7 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC33.53■■■□□ 2.96
Col16a1Q8BLX7 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
Col16a1Q8BLX7 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
Col16a1Q8BLX7 Gm11175-201ENSMUST00000116172 543 ntBASIC33.51■■■□□ 2.95
Col16a1Q8BLX7 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
Col16a1Q8BLX7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC33.5■■■□□ 2.95
Col16a1Q8BLX7 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
Col16a1Q8BLX7 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
Col16a1Q8BLX7 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
Col16a1Q8BLX7 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC33.47■■■□□ 2.95
Col16a1Q8BLX7 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC33.46■■■□□ 2.95
Col16a1Q8BLX7 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC33.45■■■□□ 2.95
Col16a1Q8BLX7 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC33.45■■■□□ 2.95
Col16a1Q8BLX7 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
Col16a1Q8BLX7 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC33.43■■■□□ 2.94
Col16a1Q8BLX7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Col16a1Q8BLX7 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Col16a1Q8BLX7 Mir6538-201ENSMUST00000183713 110 ntBASIC33.42■■■□□ 2.94
Col16a1Q8BLX7 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
Col16a1Q8BLX7 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
Col16a1Q8BLX7 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC33.4■■■□□ 2.94
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms