Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
FAM78BQ5VT40 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC20.93■□□□□ 0.94
FAM78BQ5VT40 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
FAM78BQ5VT40 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC20.93■□□□□ 0.94
FAM78BQ5VT40 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FAM78BQ5VT40 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FAM78BQ5VT40 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FAM78BQ5VT40 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
FAM78BQ5VT40 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.9■□□□□ 0.94
FAM78BQ5VT40 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
FAM78BQ5VT40 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FAM78BQ5VT40 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
FAM78BQ5VT40 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FAM78BQ5VT40 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
FAM78BQ5VT40 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC20.88■□□□□ 0.93
FAM78BQ5VT40 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FAM78BQ5VT40 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.87■□□□□ 0.93
FAM78BQ5VT40 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
FAM78BQ5VT40 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
FAM78BQ5VT40 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
FAM78BQ5VT40 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FAM78BQ5VT40 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
FAM78BQ5VT40 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FAM78BQ5VT40 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FAM78BQ5VT40 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
FAM78BQ5VT40 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
FAM78BQ5VT40 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FAM78BQ5VT40 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
FAM78BQ5VT40 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
FAM78BQ5VT40 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
FAM78BQ5VT40 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
FAM78BQ5VT40 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FAM78BQ5VT40 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FAM78BQ5VT40 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
FAM78BQ5VT40 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC20.82■□□□□ 0.92
FAM78BQ5VT40 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
FAM78BQ5VT40 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FAM78BQ5VT40 DYNLL1-208ENST00000550178 581 ntBASIC20.82■□□□□ 0.92
FAM78BQ5VT40 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
FAM78BQ5VT40 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FAM78BQ5VT40 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FAM78BQ5VT40 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.81■□□□□ 0.92
FAM78BQ5VT40 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FAM78BQ5VT40 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
FAM78BQ5VT40 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FAM78BQ5VT40 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FAM78BQ5VT40 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
FAM78BQ5VT40 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
FAM78BQ5VT40 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FAM78BQ5VT40 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FAM78BQ5VT40 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
FAM78BQ5VT40 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FAM78BQ5VT40 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FAM78BQ5VT40 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FAM78BQ5VT40 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
FAM78BQ5VT40 AP002365.1-201ENST00000603448 772 ntBASIC20.76■□□□□ 0.91
FAM78BQ5VT40 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FAM78BQ5VT40 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
FAM78BQ5VT40 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
FAM78BQ5VT40 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FAM78BQ5VT40 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC20.75■□□□□ 0.91
FAM78BQ5VT40 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FAM78BQ5VT40 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.75■□□□□ 0.91
FAM78BQ5VT40 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.74■□□□□ 0.91
FAM78BQ5VT40 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FAM78BQ5VT40 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
FAM78BQ5VT40 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC20.74■□□□□ 0.91
FAM78BQ5VT40 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
FAM78BQ5VT40 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FAM78BQ5VT40 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
FAM78BQ5VT40 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
FAM78BQ5VT40 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FAM78BQ5VT40 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FAM78BQ5VT40 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FAM78BQ5VT40 AL135925.1-201ENST00000605920 1701 ntBASIC20.73■□□□□ 0.91
FAM78BQ5VT40 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
FAM78BQ5VT40 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.72■□□□□ 0.91
FAM78BQ5VT40 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FAM78BQ5VT40 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
FAM78BQ5VT40 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
FAM78BQ5VT40 AC135731.1-201ENST00000569415 2548 ntBASIC20.71■□□□□ 0.91
FAM78BQ5VT40 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.7■□□□□ 0.91
FAM78BQ5VT40 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FAM78BQ5VT40 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FAM78BQ5VT40 AC142086.6-201ENST00000621154 1765 ntBASIC20.7■□□□□ 0.9
FAM78BQ5VT40 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
FAM78BQ5VT40 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.7■□□□□ 0.9
FAM78BQ5VT40 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FAM78BQ5VT40 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
FAM78BQ5VT40 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.7■□□□□ 0.9
FAM78BQ5VT40 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FAM78BQ5VT40 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
FAM78BQ5VT40 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
FAM78BQ5VT40 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
FAM78BQ5VT40 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FAM78BQ5VT40 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FAM78BQ5VT40 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
FAM78BQ5VT40 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FAM78BQ5VT40 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
FAM78BQ5VT40 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 763 ms