Protein–RNA interactions for Protein: Q3U1Y4

Dennd4b, DENN domain-containing protein 4B, mousemouse

Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dennd4bQ3U1Y4 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC37.72■■■■□ 3.63
Dennd4bQ3U1Y4 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC37.72■■■■□ 3.63
Dennd4bQ3U1Y4 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC37.72■■■■□ 3.63
Dennd4bQ3U1Y4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC37.71■■■■□ 3.63
Dennd4bQ3U1Y4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC37.71■■■■□ 3.63
Dennd4bQ3U1Y4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC37.7■■■■□ 3.63
Dennd4bQ3U1Y4 Gm30346-201ENSMUST00000218641 1699 ntBASIC37.69■■■■□ 3.62
Dennd4bQ3U1Y4 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC37.68■■■■□ 3.62
Dennd4bQ3U1Y4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC37.68■■■■□ 3.62
Dennd4bQ3U1Y4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC37.65■■■■□ 3.62
Dennd4bQ3U1Y4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC37.64■■■■□ 3.62
Dennd4bQ3U1Y4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC37.64■■■■□ 3.62
Dennd4bQ3U1Y4 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC37.63■■■■□ 3.61
Dennd4bQ3U1Y4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC37.62■■■■□ 3.61
Dennd4bQ3U1Y4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC37.62■■■■□ 3.61
Dennd4bQ3U1Y4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC37.6■■■■□ 3.61
Dennd4bQ3U1Y4 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC37.59■■■■□ 3.61
Dennd4bQ3U1Y4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC37.58■■■■□ 3.61
Dennd4bQ3U1Y4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC37.57■■■■□ 3.6
Dennd4bQ3U1Y4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC37.57■■■■□ 3.6
Dennd4bQ3U1Y4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC37.57■■■■□ 3.6
Dennd4bQ3U1Y4 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC37.56■■■■□ 3.6
Dennd4bQ3U1Y4 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC37.55■■■■□ 3.6
Dennd4bQ3U1Y4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC37.54■■■■□ 3.6
Dennd4bQ3U1Y4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC37.54■■■■□ 3.6
Dennd4bQ3U1Y4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC37.53■■■■□ 3.6
Dennd4bQ3U1Y4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC37.53■■■■□ 3.6
Dennd4bQ3U1Y4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC37.52■■■■□ 3.6
Dennd4bQ3U1Y4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC37.47■■■■□ 3.59
Dennd4bQ3U1Y4 Gm7432-201ENSMUST00000210343 879 ntBASIC37.47■■■■□ 3.59
Dennd4bQ3U1Y4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC37.46■■■■□ 3.59
Dennd4bQ3U1Y4 Nkain2-201ENSMUST00000092602 558 ntBASIC37.45■■■■□ 3.59
Dennd4bQ3U1Y4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC37.45■■■■□ 3.59
Dennd4bQ3U1Y4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC37.43■■■■□ 3.58
Dennd4bQ3U1Y4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC37.43■■■■□ 3.58
Dennd4bQ3U1Y4 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC37.43■■■■□ 3.58
Dennd4bQ3U1Y4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC37.42■■■■□ 3.58
Dennd4bQ3U1Y4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC37.41■■■■□ 3.58
Dennd4bQ3U1Y4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC37.38■■■■□ 3.58
Dennd4bQ3U1Y4 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC37.38■■■■□ 3.57
Dennd4bQ3U1Y4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC37.35■■■■□ 3.57
Dennd4bQ3U1Y4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC37.35■■■■□ 3.57
Dennd4bQ3U1Y4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC37.35■■■■□ 3.57
Dennd4bQ3U1Y4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC37.34■■■■□ 3.57
Dennd4bQ3U1Y4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC37.33■■■■□ 3.57
Dennd4bQ3U1Y4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
Dennd4bQ3U1Y4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC37.33■■■■□ 3.57
Dennd4bQ3U1Y4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC37.33■■■■□ 3.57
Dennd4bQ3U1Y4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC37.31■■■■□ 3.56
Dennd4bQ3U1Y4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC37.31■■■■□ 3.56
Dennd4bQ3U1Y4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC37.31■■■■□ 3.56
Dennd4bQ3U1Y4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC37.31■■■■□ 3.56
Dennd4bQ3U1Y4 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC37.3■■■■□ 3.56
Dennd4bQ3U1Y4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC37.3■■■■□ 3.56
Dennd4bQ3U1Y4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC37.3■■■■□ 3.56
Dennd4bQ3U1Y4 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC37.3■■■■□ 3.56
Dennd4bQ3U1Y4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC37.29■■■■□ 3.56
Dennd4bQ3U1Y4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC37.28■■■■□ 3.56
Dennd4bQ3U1Y4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC37.28■■■■□ 3.56
Dennd4bQ3U1Y4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC37.28■■■■□ 3.56
Dennd4bQ3U1Y4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC37.27■■■■□ 3.56
Dennd4bQ3U1Y4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC37.27■■■■□ 3.56
Dennd4bQ3U1Y4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC37.26■■■■□ 3.56
Dennd4bQ3U1Y4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC37.25■■■■□ 3.55
Dennd4bQ3U1Y4 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC37.24■■■■□ 3.55
Dennd4bQ3U1Y4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC37.24■■■■□ 3.55
Dennd4bQ3U1Y4 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
Dennd4bQ3U1Y4 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
Dennd4bQ3U1Y4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC37.21■■■■□ 3.55
Dennd4bQ3U1Y4 Mir6538-201ENSMUST00000183713 110 ntBASIC37.21■■■■□ 3.55
Dennd4bQ3U1Y4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC37.21■■■■□ 3.55
Dennd4bQ3U1Y4 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC37.21■■■■□ 3.55
Dennd4bQ3U1Y4 Gm11599-201ENSMUST00000118720 878 ntBASIC37.2■■■■□ 3.55
Dennd4bQ3U1Y4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC37.2■■■■□ 3.54
Dennd4bQ3U1Y4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC37.19■■■■□ 3.54
Dennd4bQ3U1Y4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC37.17■■■■□ 3.54
Dennd4bQ3U1Y4 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC37.17■■■■□ 3.54
Dennd4bQ3U1Y4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC37.17■■■■□ 3.54
Dennd4bQ3U1Y4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC37.16■■■■□ 3.54
Dennd4bQ3U1Y4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC37.16■■■■□ 3.54
Dennd4bQ3U1Y4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC37.14■■■■□ 3.54
Dennd4bQ3U1Y4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC37.14■■■■□ 3.54
Dennd4bQ3U1Y4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC37.14■■■■□ 3.54
Dennd4bQ3U1Y4 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC37.14■■■■□ 3.54
Dennd4bQ3U1Y4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC37.13■■■■□ 3.53
Dennd4bQ3U1Y4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC37.11■■■■□ 3.53
Dennd4bQ3U1Y4 Gm11175-201ENSMUST00000116172 543 ntBASIC37.1■■■■□ 3.53
Dennd4bQ3U1Y4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC37.09■■■■□ 3.53
Dennd4bQ3U1Y4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC37.09■■■■□ 3.53
Dennd4bQ3U1Y4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC37.09■■■■□ 3.53
Dennd4bQ3U1Y4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC37.08■■■■□ 3.53
Dennd4bQ3U1Y4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC37.08■■■■□ 3.53
Dennd4bQ3U1Y4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC37.06■■■■□ 3.52
Dennd4bQ3U1Y4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC37.05■■■■□ 3.52
Dennd4bQ3U1Y4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC37.05■■■■□ 3.52
Dennd4bQ3U1Y4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC37.04■■■■□ 3.52
Dennd4bQ3U1Y4 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
Dennd4bQ3U1Y4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
Dennd4bQ3U1Y4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC37.03■■■■□ 3.52
Dennd4bQ3U1Y4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC37.02■■■■□ 3.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms