Protein–RNA interactions for Protein: Q04437

YKU80, ATP-dependent DNA helicase II subunit 2, yeastyeast

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YKU80Q04437 YER190C-AYER190C-A 576 nt9.16□□□□□ -0.94
YKU80Q04437 CLB6YGR109C 1143 nt9.16□□□□□ -0.94
YKU80Q04437 YGR296C-AYGR296C-A 576 nt9.16□□□□□ -0.94
YKU80Q04437 YML133W-AYML133W-A 576 nt9.16□□□□□ -0.94
YKU80Q04437 YNL339W-AYNL339W-A 576 nt9.16□□□□□ -0.94
YKU80Q04437 YPL283W-AYPL283W-A 576 nt9.16□□□□□ -0.94
YKU80Q04437 QDR2YIL121W 1629 nt9.16□□□□□ -0.94
YKU80Q04437 NRT1YOR071C 1797 nt9.15□□□□□ -0.94
YKU80Q04437 SED1YDR077W 1017 nt9.15□□□□□ -0.94
YKU80Q04437 ACH1YBL015W 1581 nt9.15□□□□□ -0.95
YKU80Q04437 PCP1YGR101W 1041 nt9.14□□□□□ -0.95
YKU80Q04437 UTH1YKR042W 1098 nt9.13□□□□□ -0.95
YKU80Q04437 AIM45YPR004C 1035 nt9.13□□□□□ -0.95
YKU80Q04437 MEP3YPR138C 1470 nt9.13□□□□□ -0.95
YKU80Q04437 GID8YMR135C 1368 nt9.12□□□□□ -0.95
YKU80Q04437 RPL4BYDR012W 1089 nt9.12□□□□□ -0.95
YKU80Q04437 YOR072WYOR072W 315 nt9.12□□□□□ -0.95
YKU80Q04437 RPL4AYBR031W 1089 nt9.12□□□□□ -0.95
YKU80Q04437 MTG2YHR168W 1557 nt9.12□□□□□ -0.95
YKU80Q04437 SAM1YLR180W 1149 nt9.11□□□□□ -0.95
YKU80Q04437 Q0010Q0010 387 nt9.11□□□□□ -0.95
YKU80Q04437 HXT10YFL011W 1641 nt9.11□□□□□ -0.95
YKU80Q04437 MRS6YOR370C 1812 nt9.1□□□□□ -0.95
YKU80Q04437 GTB1YDR221W 2109 nt9.1□□□□□ -0.95
YKU80Q04437 MDM35YKL053C-A 261 nt9.09□□□□□ -0.95
YKU80Q04437 AKR2YOR034C 2250 nt9.08□□□□□ -0.96
YKU80Q04437 TOA2YKL058W 369 nt9.08□□□□□ -0.96
YKU80Q04437 OYE3YPL171C 1203 nt9.08□□□□□ -0.96
YKU80Q04437 ALP1YNL270C 1722 nt9.08□□□□□ -0.96
YKU80Q04437 LEU9YOR108W 1815 nt9.08□□□□□ -0.96
YKU80Q04437 PET8YNL003C 855 nt9.07□□□□□ -0.96
YKU80Q04437 FIT3YOR383C 615 nt9.07□□□□□ -0.96
YKU80Q04437 FMS1YMR020W 1527 nt9.06□□□□□ -0.96
YKU80Q04437 SPP2YOR148C 558 nt9.06□□□□□ -0.96
YKU80Q04437 DIG1YPL049C 1359 nt9.06□□□□□ -0.96
YKU80Q04437 YKL133CYKL133C 1392 nt9.05□□□□□ -0.96
YKU80Q04437 BRR1YPR057W 1026 nt9.05□□□□□ -0.96
YKU80Q04437 RBG1YAL036C 1110 nt9.04□□□□□ -0.96
YKU80Q04437 RPS14BYJL191W 417 nt9.03□□□□□ -0.96
YKU80Q04437 MEX67YPL169C 1800 nt9.02□□□□□ -0.97
YKU80Q04437 MDL2YPL270W 2322 nt9.02□□□□□ -0.97
YKU80Q04437 MTO1YGL236C 2010 nt9.01□□□□□ -0.97
YKU80Q04437 YHR219WYHR219W 1875 nt9□□□□□ -0.97
YKU80Q04437 PHO23YNL097C 993 nt9□□□□□ -0.97
YKU80Q04437 GND2YGR256W 1479 nt9□□□□□ -0.97
YKU80Q04437 NBA1YOL070C 1506 nt9□□□□□ -0.97
YKU80Q04437 VPS62YGR141W 1404 nt8.99□□□□□ -0.97
YKU80Q04437 YDL086WYDL086W 822 nt8.99□□□□□ -0.97
YKU80Q04437 CWP2YKL096W-A 279 nt8.99□□□□□ -0.97
YKU80Q04437 SBA1YKL117W 651 nt8.99□□□□□ -0.97
YKU80Q04437 YPL251WYPL251W 303 nt8.99□□□□□ -0.97
YKU80Q04437 TRT2tT(CGU)K 72 nt8.97□□□□□ -0.97
YKU80Q04437 AGP3YFL055W 1677 nt8.97□□□□□ -0.97
YKU80Q04437 TOK1YJL093C 2076 nt8.96□□□□□ -0.97
YKU80Q04437 YPS3YLR121C 1527 nt8.96□□□□□ -0.97
YKU80Q04437 SAM2YDR502C 1155 nt8.96□□□□□ -0.98
YKU80Q04437 YMR103CYMR103C 363 nt8.96□□□□□ -0.98
YKU80Q04437 YDR306CYDR306C 1437 nt8.96□□□□□ -0.98
YKU80Q04437 FLR1YBR008C 1647 nt8.95□□□□□ -0.98
YKU80Q04437 RSC4YKR008W 1878 nt8.94□□□□□ -0.98
YKU80Q04437 NME1NME1 340 nt8.94□□□□□ -0.98
YKU80Q04437 GAL2YLR081W 1725 nt8.94□□□□□ -0.98
YKU80Q04437 TSC10YBR265W 963 nt8.93□□□□□ -0.98
YKU80Q04437 SDH5YOL071W 489 nt8.92□□□□□ -0.98
YKU80Q04437 YRF1-2YER190W 5046 nt8.91□□□□□ -0.98
YKU80Q04437 GLR1YPL091W 1452 nt8.88□□□□□ -0.99
YKU80Q04437 PUS7YOR243C 2031 nt8.87□□□□□ -0.99
YKU80Q04437 LSR1LSR1 1175 nt8.87□□□□□ -0.99
YKU80Q04437 DAK2YFL053W 1776 nt8.86□□□□□ -0.99
YKU80Q04437 YLR279WYLR279W 390 nt8.86□□□□□ -0.99
YKU80Q04437 DLD2YDL178W 1593 nt8.86□□□□□ -0.99
YKU80Q04437 TIM44YIL022W 1296 nt8.85□□□□□ -0.99
YKU80Q04437 YJR154WYJR154W 1041 nt8.85□□□□□ -0.99
YKU80Q04437 HEM13YDR044W 987 nt8.84□□□□□ -0.99
YKU80Q04437 tD(GUC)BtD(GUC)B 72 nt8.84□□□□□ -0.99
YKU80Q04437 tD(GUC)DtD(GUC)D 72 nt8.84□□□□□ -0.99
YKU80Q04437 tD(GUC)G1tD(GUC)G1 72 nt8.84□□□□□ -0.99
YKU80Q04437 tD(GUC)G2tD(GUC)G2 72 nt8.84□□□□□ -0.99
YKU80Q04437 tD(GUC)I1tD(GUC)I1 72 nt8.84□□□□□ -0.99
YKU80Q04437 tD(GUC)I2tD(GUC)I2 72 nt8.84□□□□□ -0.99
YKU80Q04437 tD(GUC)J1tD(GUC)J1 72 nt8.84□□□□□ -0.99
YKU80Q04437 tD(GUC)J2tD(GUC)J2 72 nt8.84□□□□□ -0.99
YKU80Q04437 tD(GUC)J3tD(GUC)J3 72 nt8.84□□□□□ -0.99
YKU80Q04437 tD(GUC)J4tD(GUC)J4 72 nt8.84□□□□□ -0.99
YKU80Q04437 tD(GUC)KtD(GUC)K 72 nt8.84□□□□□ -0.99
YKU80Q04437 tD(GUC)L1tD(GUC)L1 72 nt8.84□□□□□ -0.99
YKU80Q04437 tD(GUC)L2tD(GUC)L2 72 nt8.84□□□□□ -0.99
YKU80Q04437 tD(GUC)MtD(GUC)M 72 nt8.84□□□□□ -0.99
YKU80Q04437 tD(GUC)OtD(GUC)O 72 nt8.84□□□□□ -0.99
YKU80Q04437 YGR012WYGR012W 1182 nt8.84□□□□□ -0.99
YKU80Q04437 SEC61YLR378C 1443 nt8.84□□□□□ -0.99
YKU80Q04437 DLD3YEL071W 1491 nt8.83□□□□□ -1
YKU80Q04437 YMR262WYMR262W 942 nt8.83□□□□□ -1
YKU80Q04437 MIM1YOL026C 342 nt8.83□□□□□ -1
YKU80Q04437 RPD3YNL330C 1302 nt8.82□□□□□ -1
YKU80Q04437 MSB4YOL112W 1479 nt8.82□□□□□ -1
YKU80Q04437 UFD1YGR048W 1086 nt8.81□□□□□ -1
YKU80Q04437 YMR244WYMR244W 1068 nt8.81□□□□□ -1
YKU80Q04437 FET5YFL041W 1869 nt8.81□□□□□ -1
YKU80Q04437 RAD23YEL037C 1197 nt8.8□□□□□ -1
Retrieved 100 of 7,029 protein–RNA pairs in 82 ms