Protein–RNA interactions for Protein: Q02199

NUP49, Nucleoporin NUP49/NSP49, yeastyeast

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP49Q02199 RPS14BYJL191W 417 nt8.61□□□□□ -1.03
NUP49Q02199 SSN3YPL042C 1668 nt8.61□□□□□ -1.03
NUP49Q02199 SFP1YLR403W 2052 nt8.6□□□□□ -1.03
NUP49Q02199 RSC8YFR037C 1674 nt8.6□□□□□ -1.03
NUP49Q02199 RBG1YAL036C 1110 nt8.6□□□□□ -1.03
NUP49Q02199 SBA1YKL117W 651 nt8.6□□□□□ -1.03
NUP49Q02199 YMR103CYMR103C 363 nt8.59□□□□□ -1.03
NUP49Q02199 FLR1YBR008C 1647 nt8.58□□□□□ -1.04
NUP49Q02199 MEP3YPR138C 1470 nt8.58□□□□□ -1.04
NUP49Q02199 VPS62YGR141W 1404 nt8.58□□□□□ -1.04
NUP49Q02199 YPS3YLR121C 1527 nt8.58□□□□□ -1.04
NUP49Q02199 QDR2YIL121W 1629 nt8.58□□□□□ -1.04
NUP49Q02199 PSD1YNL169C 1503 nt8.56□□□□□ -1.04
NUP49Q02199 YDL086WYDL086W 822 nt8.56□□□□□ -1.04
NUP49Q02199 SAM2YDR502C 1155 nt8.55□□□□□ -1.04
NUP49Q02199 DIG1YPL049C 1359 nt8.54□□□□□ -1.04
NUP49Q02199 DMA2YNL116W 1569 nt8.53□□□□□ -1.04
NUP49Q02199 DLD2YDL178W 1593 nt8.52□□□□□ -1.04
NUP49Q02199 OXA1YER154W 1209 nt8.52□□□□□ -1.05
NUP49Q02199 ODC1YPL134C 933 nt8.51□□□□□ -1.05
NUP49Q02199 SEC61YLR378C 1443 nt8.51□□□□□ -1.05
NUP49Q02199 GID8YMR135C 1368 nt8.5□□□□□ -1.05
NUP49Q02199 CYT1YOR065W 930 nt8.5□□□□□ -1.05
NUP49Q02199 YHL008CYHL008C 1884 nt8.49□□□□□ -1.05
NUP49Q02199 NPP1YCR026C 2229 nt8.49□□□□□ -1.05
NUP49Q02199 HEM13YDR044W 987 nt8.48□□□□□ -1.05
NUP49Q02199 TSC10YBR265W 963 nt8.48□□□□□ -1.05
NUP49Q02199 SSL2YIL143C 2532 nt8.48□□□□□ -1.05
NUP49Q02199 UGA4YDL210W 1716 nt8.47□□□□□ -1.05
NUP49Q02199 MRS6YOR370C 1812 nt8.47□□□□□ -1.05
NUP49Q02199 BSP1YPR171W 1731 nt8.46□□□□□ -1.05
NUP49Q02199 YHR218WYHR218W 1812 nt8.46□□□□□ -1.06
NUP49Q02199 GID7YCL039W 2238 nt8.45□□□□□ -1.06
NUP49Q02199 YLR279WYLR279W 390 nt8.44□□□□□ -1.06
NUP49Q02199 YKL133CYKL133C 1392 nt8.44□□□□□ -1.06
NUP49Q02199 YER188WYER188W 720 nt8.42□□□□□ -1.06
NUP49Q02199 SDH5YOL071W 489 nt8.42□□□□□ -1.06
NUP49Q02199 YHR219WYHR219W 1875 nt8.42□□□□□ -1.06
NUP49Q02199 GLR1YPL091W 1452 nt8.41□□□□□ -1.06
NUP49Q02199 BNI5YNL166C 1347 nt8.41□□□□□ -1.06
NUP49Q02199 YGR012WYGR012W 1182 nt8.41□□□□□ -1.06
NUP49Q02199 PHO23YNL097C 993 nt8.41□□□□□ -1.06
NUP49Q02199 MSC1YML128C 1542 nt8.4□□□□□ -1.06
NUP49Q02199 HMG2YLR450W 3138 nt8.4□□□□□ -1.07
NUP49Q02199 MSB4YOL112W 1479 nt8.39□□□□□ -1.07
NUP49Q02199 FUB1YCR076C 753 nt8.39□□□□□ -1.07
NUP49Q02199 MDM35YKL053C-A 261 nt8.39□□□□□ -1.07
NUP49Q02199 CWP2YKL096W-A 279 nt8.39□□□□□ -1.07
NUP49Q02199 TPO4YOR273C 1980 nt8.39□□□□□ -1.07
NUP49Q02199 APT2YDR441C 546 nt8.37□□□□□ -1.07
NUP49Q02199 OSH7YHR001W 1314 nt8.36□□□□□ -1.07
NUP49Q02199 RAD23YEL037C 1197 nt8.36□□□□□ -1.07
NUP49Q02199 AIM1YAL046C 357 nt8.36□□□□□ -1.07
NUP49Q02199 FCY21YER060W 1587 nt8.35□□□□□ -1.07
NUP49Q02199 DLD3YEL071W 1491 nt8.35□□□□□ -1.07
NUP49Q02199 YRF1-2YER190W 5046 nt8.34□□□□□ -1.07
NUP49Q02199 HXT10YFL011W 1641 nt8.34□□□□□ -1.07
NUP49Q02199 TAT2YOL020W 1779 nt8.33□□□□□ -1.08
NUP49Q02199 YMR244WYMR244W 1068 nt8.33□□□□□ -1.08
NUP49Q02199 YLR046CYLR046C 813 nt8.32□□□□□ -1.08
NUP49Q02199 YLR111WYLR111W 333 nt8.32□□□□□ -1.08
NUP49Q02199 LSR1LSR1 1175 nt8.32□□□□□ -1.08
NUP49Q02199 ENT4YLL038C 744 nt8.31□□□□□ -1.08
NUP49Q02199 CSM1YCR086W 573 nt8.3□□□□□ -1.08
NUP49Q02199 CAB5YDR196C 726 nt8.3□□□□□ -1.08
NUP49Q02199 RPD3YNL330C 1302 nt8.29□□□□□ -1.08
NUP49Q02199 RIB3YDR487C 627 nt8.28□□□□□ -1.08
NUP49Q02199 TIM44YIL022W 1296 nt8.28□□□□□ -1.08
NUP49Q02199 YMR226CYMR226C 804 nt8.28□□□□□ -1.08
NUP49Q02199 YPL222C-AYPL222C-A 246 nt8.28□□□□□ -1.08
NUP49Q02199 SOL2YCR073W-A 948 nt8.27□□□□□ -1.09
NUP49Q02199 GPN2YOR262W 1044 nt8.27□□□□□ -1.09
NUP49Q02199 NUC1YJL208C 990 nt8.26□□□□□ -1.09
NUP49Q02199 ASP3-1YLR155C 1089 nt8.26□□□□□ -1.09
NUP49Q02199 ASP3-2YLR157C 1089 nt8.26□□□□□ -1.09
NUP49Q02199 ASP3-3YLR158C 1089 nt8.26□□□□□ -1.09
NUP49Q02199 ASP3-4YLR160C 1089 nt8.26□□□□□ -1.09
NUP49Q02199 YMR262WYMR262W 942 nt8.26□□□□□ -1.09
NUP49Q02199 RAS2YNL098C 969 nt8.26□□□□□ -1.09
NUP49Q02199 HXK1YFR053C 1458 nt8.26□□□□□ -1.09
NUP49Q02199 ITR2YOL103W 1830 nt8.25□□□□□ -1.09
NUP49Q02199 YLR437C-AYLR437C-A 228 nt8.25□□□□□ -1.09
NUP49Q02199 AGP3YFL055W 1677 nt8.24□□□□□ -1.09
NUP49Q02199 ALD5YER073W 1563 nt8.24□□□□□ -1.09
NUP49Q02199 PRY1YJL079C 900 nt8.24□□□□□ -1.09
NUP49Q02199 ESBP6YNL125C 2022 nt8.24□□□□□ -1.09
NUP49Q02199 VMA11YPL234C 495 nt8.23□□□□□ -1.09
NUP49Q02199 YDR455CYDR455C 309 nt8.22□□□□□ -1.09
NUP49Q02199 PCP1YGR101W 1041 nt8.22□□□□□ -1.09
NUP49Q02199 SAM3YPL274W 1764 nt8.22□□□□□ -1.09
NUP49Q02199 URA8YJR103W 1737 nt8.2□□□□□ -1.1
NUP49Q02199 GND1YHR183W 1470 nt8.2□□□□□ -1.1
NUP49Q02199 NBA1YOL070C 1506 nt8.2□□□□□ -1.1
NUP49Q02199 RBG2YGR173W 1107 nt8.2□□□□□ -1.1
NUP49Q02199 RPC31YNL151C 756 nt8.2□□□□□ -1.1
NUP49Q02199 EAF3YPR023C 1206 nt8.2□□□□□ -1.1
NUP49Q02199 RIM2YBR192W 1134 nt8.2□□□□□ -1.1
NUP49Q02199 SMM1YNR015W 1155 nt8.19□□□□□ -1.1
NUP49Q02199 LOT5YKL183W 921 nt8.18□□□□□ -1.1
NUP49Q02199 LSB5YCL034W 1065 nt8.18□□□□□ -1.1
Retrieved 100 of 7,029 protein–RNA pairs in 15.8 ms