Protein–RNA interactions for Protein: P40567

MSL1, U2 small nuclear ribonucleoprotein B'', yeastyeast

Predicted RBP Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSL1P40567 YNL339W-AYNL339W-A 576 nt7.05□□□□□ -1.28
MSL1P40567 YPL283W-AYPL283W-A 576 nt7.05□□□□□ -1.28
MSL1P40567 TOA2YKL058W 369 nt7.04□□□□□ -1.28
MSL1P40567 MIM1YOL026C 342 nt7.04□□□□□ -1.28
MSL1P40567 UFD1YGR048W 1086 nt7.03□□□□□ -1.28
MSL1P40567 YAR028WYAR028W 705 nt7.03□□□□□ -1.28
MSL1P40567 BRR1YPR057W 1026 nt7.03□□□□□ -1.28
MSL1P40567 HEM14YER014W 1620 nt7.02□□□□□ -1.29
MSL1P40567 tD(GUC)BtD(GUC)B 72 nt7.02□□□□□ -1.29
MSL1P40567 tD(GUC)DtD(GUC)D 72 nt7.02□□□□□ -1.29
MSL1P40567 tD(GUC)G1tD(GUC)G1 72 nt7.02□□□□□ -1.29
MSL1P40567 tD(GUC)G2tD(GUC)G2 72 nt7.02□□□□□ -1.29
MSL1P40567 tD(GUC)I1tD(GUC)I1 72 nt7.02□□□□□ -1.29
MSL1P40567 tD(GUC)I2tD(GUC)I2 72 nt7.02□□□□□ -1.29
MSL1P40567 tD(GUC)J1tD(GUC)J1 72 nt7.02□□□□□ -1.29
MSL1P40567 tD(GUC)J2tD(GUC)J2 72 nt7.02□□□□□ -1.29
MSL1P40567 tD(GUC)J3tD(GUC)J3 72 nt7.02□□□□□ -1.29
MSL1P40567 tD(GUC)J4tD(GUC)J4 72 nt7.02□□□□□ -1.29
MSL1P40567 tD(GUC)KtD(GUC)K 72 nt7.02□□□□□ -1.29
MSL1P40567 tD(GUC)L1tD(GUC)L1 72 nt7.02□□□□□ -1.29
MSL1P40567 tD(GUC)L2tD(GUC)L2 72 nt7.02□□□□□ -1.29
MSL1P40567 tD(GUC)MtD(GUC)M 72 nt7.02□□□□□ -1.29
MSL1P40567 tD(GUC)OtD(GUC)O 72 nt7.02□□□□□ -1.29
MSL1P40567 TRT2tT(CGU)K 72 nt7.02□□□□□ -1.29
MSL1P40567 TIM44YIL022W 1296 nt7.02□□□□□ -1.29
MSL1P40567 LPD1YFL018C 1500 nt7.01□□□□□ -1.29
MSL1P40567 YPS3YLR121C 1527 nt7.01□□□□□ -1.29
MSL1P40567 FIT1YDR534C 1587 nt7.01□□□□□ -1.29
MSL1P40567 YMR262WYMR262W 942 nt7.01□□□□□ -1.29
MSL1P40567 SPP1YPL138C 1062 nt7.01□□□□□ -1.29
MSL1P40567 HBS1YKR084C 1836 nt7.01□□□□□ -1.29
MSL1P40567 YPL251WYPL251W 303 nt7□□□□□ -1.29
MSL1P40567 LSB5YCL034W 1065 nt7□□□□□ -1.29
MSL1P40567 GND2YGR256W 1479 nt6.99□□□□□ -1.29
MSL1P40567 RPD3YNL330C 1302 nt6.99□□□□□ -1.29
MSL1P40567 FLR1YBR008C 1647 nt6.98□□□□□ -1.29
MSL1P40567 NSG2YNL156C 900 nt6.97□□□□□ -1.29
MSL1P40567 PRE6YOL038W 765 nt6.96□□□□□ -1.3
MSL1P40567 TIF6YPR016C 738 nt6.96□□□□□ -1.3
MSL1P40567 MTG2YHR168W 1557 nt6.95□□□□□ -1.3
MSL1P40567 INH1YDL181W 258 nt6.95□□□□□ -1.3
MSL1P40567 tL(GAG)GtL(GAG)G 82 nt6.95□□□□□ -1.3
MSL1P40567 TOM6YOR045W 186 nt6.95□□□□□ -1.3
MSL1P40567 DLD3YEL071W 1491 nt6.94□□□□□ -1.3
MSL1P40567 YIL177CYIL177C 5277 nt6.93□□□□□ -1.3
MSL1P40567 SAM2YDR502C 1155 nt6.93□□□□□ -1.3
MSL1P40567 RIM2YBR192W 1134 nt6.93□□□□□ -1.3
MSL1P40567 FRA1YLL029W 2250 nt6.93□□□□□ -1.3
MSL1P40567 FET5YFL041W 1869 nt6.92□□□□□ -1.3
MSL1P40567 KRR1YCL059C 951 nt6.92□□□□□ -1.3
MSL1P40567 DLD2YDL178W 1593 nt6.91□□□□□ -1.3
MSL1P40567 DUR3YHL016C 2208 nt6.91□□□□□ -1.3
MSL1P40567 YHL019W-AYHL019W-A 594 nt6.91□□□□□ -1.3
MSL1P40567 VPS75YNL246W 795 nt6.91□□□□□ -1.3
MSL1P40567 SFL1YOR140W 2301 nt6.91□□□□□ -1.3
MSL1P40567 LSM5YER146W 282 nt6.9□□□□□ -1.3
MSL1P40567 OXA1YER154W 1209 nt6.9□□□□□ -1.3
MSL1P40567 RPC31YNL151C 756 nt6.9□□□□□ -1.3
MSL1P40567 YNL115CYNL115C 1935 nt6.89□□□□□ -1.31
MSL1P40567 SFA1YDL168W 1161 nt6.89□□□□□ -1.31
MSL1P40567 HEM13YDR044W 987 nt6.89□□□□□ -1.31
MSL1P40567 UTH1YKR042W 1098 nt6.89□□□□□ -1.31
MSL1P40567 YLR046CYLR046C 813 nt6.89□□□□□ -1.31
MSL1P40567 SEC61YLR378C 1443 nt6.89□□□□□ -1.31
MSL1P40567 HIP1YGR191W 1812 nt6.89□□□□□ -1.31
MSL1P40567 ALR1YOL130W 2580 nt6.88□□□□□ -1.31
MSL1P40567 YMR103CYMR103C 363 nt6.88□□□□□ -1.31
MSL1P40567 ORT1YOR130C 879 nt6.88□□□□□ -1.31
MSL1P40567 AKR2YOR034C 2250 nt6.88□□□□□ -1.31
MSL1P40567 POP2YNR052C 1302 nt6.87□□□□□ -1.31
MSL1P40567 ENT4YLL038C 744 nt6.87□□□□□ -1.31
MSL1P40567 DUS3YLR401C 2007 nt6.87□□□□□ -1.31
MSL1P40567 MSF1YPR047W 1410 nt6.85□□□□□ -1.31
MSL1P40567 DPL1YDR294C 1770 nt6.85□□□□□ -1.31
MSL1P40567 PEX2YJL210W 816 nt6.85□□□□□ -1.31
MSL1P40567 AIM1YAL046C 357 nt6.85□□□□□ -1.31
MSL1P40567 VMA11YPL234C 495 nt6.85□□□□□ -1.31
MSL1P40567 ALP1YNL270C 1722 nt6.84□□□□□ -1.31
MSL1P40567 MET30YIL046W 1923 nt6.84□□□□□ -1.31
MSL1P40567 LEU4YNL104C 1860 nt6.84□□□□□ -1.31
MSL1P40567 MET28YIR017C 564 nt6.84□□□□□ -1.31
MSL1P40567 ADE16YLR028C 1776 nt6.84□□□□□ -1.31
MSL1P40567 YRF1-1YDR545W 5391 nt6.84□□□□□ -1.32
MSL1P40567 YRF1-5YLR467W 5391 nt6.84□□□□□ -1.32
MSL1P40567 YRF1-8YOR396W 5391 nt6.84□□□□□ -1.32
MSL1P40567 YNL190WYNL190W 615 nt6.83□□□□□ -1.32
MSL1P40567 YRF1-3YGR296W 5580 nt6.82□□□□□ -1.32
MSL1P40567 YRF1-6YNL339C 5580 nt6.82□□□□□ -1.32
MSL1P40567 YRF1-7YPL283C 5580 nt6.82□□□□□ -1.32
MSL1P40567 NPP2YEL016C 1482 nt6.81□□□□□ -1.32
MSL1P40567 RTG2YGL252C 1767 nt6.81□□□□□ -1.32
MSL1P40567 PEX25YPL112C 1185 nt6.8□□□□□ -1.32
MSL1P40567 snR4snR4 186 nt6.8□□□□□ -1.32
MSL1P40567 ITR2YOL103W 1830 nt6.8□□□□□ -1.32
MSL1P40567 HXT12YIL170W 1374 nt6.79□□□□□ -1.32
MSL1P40567 RSC4YKR008W 1878 nt6.79□□□□□ -1.32
MSL1P40567 YDR010CYDR010C 333 nt6.78□□□□□ -1.32
MSL1P40567 YER188WYER188W 720 nt6.78□□□□□ -1.32
MSL1P40567 TIP1YBR067C 633 nt6.78□□□□□ -1.32
MSL1P40567 HXT11YOL156W 1704 nt6.78□□□□□ -1.32
Retrieved 100 of 7,029 protein–RNA pairs in 57.8 ms