Protein–RNA interactions for Protein: P04628

WNT1, Proto-oncogene Wnt-1, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT1P04628 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
WNT1P04628 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
WNT1P04628 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
WNT1P04628 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
WNT1P04628 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.59■■□□□ 1.85
WNT1P04628 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.59■■□□□ 1.85
WNT1P04628 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.59■■□□□ 1.85
WNT1P04628 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
WNT1P04628 MIR6090-201ENST00000622481 60 ntBASIC26.57■■□□□ 1.84
WNT1P04628 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.57■■□□□ 1.84
WNT1P04628 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
WNT1P04628 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
WNT1P04628 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
WNT1P04628 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
WNT1P04628 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
WNT1P04628 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.54■■□□□ 1.84
WNT1P04628 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
WNT1P04628 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
WNT1P04628 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
WNT1P04628 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
WNT1P04628 AC108673.1-201ENST00000510422 1159 ntBASIC26.51■■□□□ 1.83
WNT1P04628 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
WNT1P04628 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
WNT1P04628 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
WNT1P04628 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.49■■□□□ 1.83
WNT1P04628 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
WNT1P04628 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
WNT1P04628 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.48■■□□□ 1.83
WNT1P04628 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.48■■□□□ 1.83
WNT1P04628 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
WNT1P04628 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
WNT1P04628 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
WNT1P04628 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
WNT1P04628 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
WNT1P04628 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
WNT1P04628 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
WNT1P04628 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
WNT1P04628 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.45■■□□□ 1.82
WNT1P04628 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
WNT1P04628 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.44■■□□□ 1.82
WNT1P04628 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
WNT1P04628 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
WNT1P04628 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
WNT1P04628 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.42■■□□□ 1.82
WNT1P04628 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
WNT1P04628 AC120057.4-201ENST00000624722 1615 ntBASIC26.41■■□□□ 1.82
WNT1P04628 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
WNT1P04628 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.82
WNT1P04628 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.38■■□□□ 1.81
WNT1P04628 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
WNT1P04628 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.37■■□□□ 1.81
WNT1P04628 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
WNT1P04628 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
WNT1P04628 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.36■■□□□ 1.81
WNT1P04628 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
WNT1P04628 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.35■■□□□ 1.81
WNT1P04628 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.34■■□□□ 1.81
WNT1P04628 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
WNT1P04628 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.33■■□□□ 1.81
WNT1P04628 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
WNT1P04628 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.33■■□□□ 1.81
WNT1P04628 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.33■■□□□ 1.81
WNT1P04628 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
WNT1P04628 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.32■■□□□ 1.8
WNT1P04628 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
WNT1P04628 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
WNT1P04628 MIR639-201ENST00000384974 98 ntBASIC26.31■■□□□ 1.8
WNT1P04628 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
WNT1P04628 MIR4449-201ENST00000578365 66 ntBASIC26.31■■□□□ 1.8
WNT1P04628 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
WNT1P04628 MIR3648-2-201ENST00000581792 180 ntBASIC26.3■■□□□ 1.8
WNT1P04628 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
WNT1P04628 MIR3648-1-201ENST00000615959 180 ntBASIC26.3■■□□□ 1.8
WNT1P04628 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
WNT1P04628 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
WNT1P04628 AC016575.1-201ENST00000607026 382 ntBASIC26.29■■□□□ 1.8
WNT1P04628 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
WNT1P04628 DUX4L11-201ENST00000611504 1267 ntBASIC26.28■■□□□ 1.8
WNT1P04628 DUX4L12-201ENST00000614593 1267 ntBASIC26.28■■□□□ 1.8
WNT1P04628 DUX4L14-201ENST00000621227 1267 ntBASIC26.28■■□□□ 1.8
WNT1P04628 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.28■■□□□ 1.8
WNT1P04628 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
WNT1P04628 LINC01971-201ENST00000617888 1048 ntBASIC26.27■■□□□ 1.8
WNT1P04628 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.27■■□□□ 1.8
WNT1P04628 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
WNT1P04628 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
WNT1P04628 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.25■■□□□ 1.79
WNT1P04628 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.24■■□□□ 1.79
WNT1P04628 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
WNT1P04628 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.23■■□□□ 1.79
WNT1P04628 CR559946.2-201ENST00000623684 991 ntBASIC26.23■■□□□ 1.79
WNT1P04628 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
WNT1P04628 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
WNT1P04628 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
WNT1P04628 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
WNT1P04628 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
WNT1P04628 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.17■■□□□ 1.78
WNT1P04628 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.17■■□□□ 1.78
WNT1P04628 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.17■■□□□ 1.78
WNT1P04628 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms