Protein–RNA interactions for Protein: O75293

GADD45B, Growth arrest and DNA damage-inducible protein GADD45 beta, humanhuman

Predicted RBP Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45BO75293 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
GADD45BO75293 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.67■■■□□ 2.5
GADD45BO75293 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
GADD45BO75293 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
GADD45BO75293 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
GADD45BO75293 AL031258.1-201ENST00000623562 325 ntBASIC30.67■■■□□ 2.5
GADD45BO75293 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
GADD45BO75293 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
GADD45BO75293 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
GADD45BO75293 EBPL-203ENST00000378270 579 ntTSL 2 BASIC30.66■■■□□ 2.5
GADD45BO75293 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
GADD45BO75293 AL135925.1-201ENST00000605920 1701 ntBASIC30.66■■■□□ 2.5
GADD45BO75293 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
GADD45BO75293 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
GADD45BO75293 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
GADD45BO75293 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
GADD45BO75293 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
GADD45BO75293 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
GADD45BO75293 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
GADD45BO75293 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
GADD45BO75293 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
GADD45BO75293 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
GADD45BO75293 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
GADD45BO75293 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
GADD45BO75293 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC30.59■■■□□ 2.49
GADD45BO75293 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC30.58■■■□□ 2.49
GADD45BO75293 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
GADD45BO75293 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC30.57■■■□□ 2.49
GADD45BO75293 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC30.57■■■□□ 2.48
GADD45BO75293 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
GADD45BO75293 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
GADD45BO75293 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
GADD45BO75293 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
GADD45BO75293 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
GADD45BO75293 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
GADD45BO75293 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
GADD45BO75293 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.54■■■□□ 2.48
GADD45BO75293 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC30.54■■■□□ 2.48
GADD45BO75293 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
GADD45BO75293 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
GADD45BO75293 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
GADD45BO75293 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
GADD45BO75293 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
GADD45BO75293 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
GADD45BO75293 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
GADD45BO75293 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.48■■■□□ 2.47
GADD45BO75293 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
GADD45BO75293 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
GADD45BO75293 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
GADD45BO75293 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC30.47■■■□□ 2.47
GADD45BO75293 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
GADD45BO75293 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC30.44■■■□□ 2.46
GADD45BO75293 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
GADD45BO75293 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC30.44■■■□□ 2.46
GADD45BO75293 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
GADD45BO75293 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
GADD45BO75293 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
GADD45BO75293 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
GADD45BO75293 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
GADD45BO75293 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC30.42■■■□□ 2.46
GADD45BO75293 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC30.39■■■□□ 2.46
GADD45BO75293 AC142086.6-201ENST00000621154 1765 ntBASIC30.39■■■□□ 2.46
GADD45BO75293 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC30.39■■■□□ 2.46
GADD45BO75293 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
GADD45BO75293 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
GADD45BO75293 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
GADD45BO75293 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC30.36■■■□□ 2.45
GADD45BO75293 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
GADD45BO75293 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC30.35■■■□□ 2.45
GADD45BO75293 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.34■■■□□ 2.45
GADD45BO75293 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
GADD45BO75293 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC30.32■■■□□ 2.45
GADD45BO75293 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
GADD45BO75293 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.32■■■□□ 2.44
GADD45BO75293 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
GADD45BO75293 AL139393.2-201ENST00000608721 2025 ntBASIC30.32■■■□□ 2.44
GADD45BO75293 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
GADD45BO75293 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
GADD45BO75293 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC30.31■■■□□ 2.44
GADD45BO75293 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
GADD45BO75293 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.29■■■□□ 2.44
GADD45BO75293 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
GADD45BO75293 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC30.28■■■□□ 2.44
GADD45BO75293 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC30.27■■■□□ 2.44
GADD45BO75293 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
GADD45BO75293 AP002365.1-201ENST00000603448 772 ntBASIC30.25■■■□□ 2.43
GADD45BO75293 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
GADD45BO75293 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
GADD45BO75293 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.25■■■□□ 2.43
GADD45BO75293 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
GADD45BO75293 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
GADD45BO75293 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
GADD45BO75293 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
GADD45BO75293 DRD5P2-201ENST00000421395 2012 ntBASIC30.22■■■□□ 2.43
GADD45BO75293 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.22■■■□□ 2.43
GADD45BO75293 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
GADD45BO75293 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
GADD45BO75293 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC30.18■■■□□ 2.42
GADD45BO75293 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
GADD45BO75293 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms